Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RORAP35398 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RORAP35398 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RORAP35398 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
RORAP35398 AC105074.1-201ENST00000623380 3095 ntBASIC4.08□□□□□ -1.76
RORAP35398 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.08□□□□□ -1.76
RORAP35398 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.08□□□□□ -1.76
RORAP35398 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.08□□□□□ -1.76
RORAP35398 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RORAP35398 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RORAP35398 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RORAP35398 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RORAP35398 RNU1-14P-201ENST00000362759 152 ntBASIC4.08□□□□□ -1.76
RORAP35398 RNA5SP175-201ENST00000364275 119 ntBASIC4.08□□□□□ -1.76
RORAP35398 RNA5SP22-201ENST00000365393 109 ntBASIC4.08□□□□□ -1.76
RORAP35398 RNU6-152P-201ENST00000384037 107 ntBASIC4.08□□□□□ -1.76
RORAP35398 RNU1-13P-201ENST00000384499 162 ntBASIC4.08□□□□□ -1.76
RORAP35398 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
RORAP35398 RPS27AP11-201ENST00000402798 447 ntBASIC4.08□□□□□ -1.76
RORAP35398 RN7SKP235-201ENST00000410662 305 ntBASIC4.08□□□□□ -1.76
RORAP35398 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.08□□□□□ -1.76
RORAP35398 UBTFL3-201ENST00000418934 1024 ntBASIC4.08□□□□□ -1.76
RORAP35398 AL356806.1-201ENST00000422524 916 ntBASIC4.08□□□□□ -1.76
RORAP35398 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.08□□□□□ -1.76
RORAP35398 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.08□□□□□ -1.76
RORAP35398 Z99127.2-201ENST00000441426 334 ntBASIC4.08□□□□□ -1.76
RORAP35398 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.08□□□□□ -1.76
RORAP35398 RPS27AP15-201ENST00000447672 466 ntBASIC4.08□□□□□ -1.76
RORAP35398 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.08□□□□□ -1.76
RORAP35398 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.08□□□□□ -1.76
RORAP35398 PSMC1P13-201ENST00000458195 985 ntBASIC4.08□□□□□ -1.76
RORAP35398 RPL35AP15-201ENST00000468042 339 ntBASIC4.08□□□□□ -1.76
RORAP35398 UBTFL6-201ENST00000477929 1024 ntBASIC4.08□□□□□ -1.76
RORAP35398 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.08□□□□□ -1.76
RORAP35398 RPS27AP13-201ENST00000498403 237 ntBASIC4.08□□□□□ -1.76
RORAP35398 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.08□□□□□ -1.76
RORAP35398 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.08□□□□□ -1.76
RORAP35398 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.08□□□□□ -1.76
RORAP35398 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.08□□□□□ -1.76
RORAP35398 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.08□□□□□ -1.76
RORAP35398 MIR2116-201ENST00000517221 80 ntBASIC4.08□□□□□ -1.76
RORAP35398 OR4V1P-201ENST00000525394 1140 ntBASIC4.08□□□□□ -1.76
RORAP35398 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.08□□□□□ -1.76
RORAP35398 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.08□□□□□ -1.76
RORAP35398 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.08□□□□□ -1.76
RORAP35398 NPM1P47-201ENST00000560843 856 ntBASIC4.08□□□□□ -1.76
RORAP35398 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.08□□□□□ -1.76
RORAP35398 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.08□□□□□ -1.76
RORAP35398 AC006116.5-201ENST00000591936 559 ntBASIC4.08□□□□□ -1.76
RORAP35398 AL160290.3-201ENST00000604869 165 ntBASIC4.08□□□□□ -1.76
RORAP35398 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.08□□□□□ -1.76
RORAP35398 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
RORAP35398 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.08□□□□□ -1.76
RORAP35398 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.08□□□□□ -1.76
RORAP35398 AC007546.1-201ENST00000619452 559 ntBASIC4.08□□□□□ -1.76
RORAP35398 AC090506.2-201ENST00000624521 419 ntBASIC4.08□□□□□ -1.76
RORAP35398 AC019080.5-201ENST00000624891 757 ntBASIC4.08□□□□□ -1.76
RORAP35398 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.08□□□□□ -1.76
RORAP35398 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RORAP35398 FP325313.1-201ENST00000638228 703 ntBASIC4.08□□□□□ -1.76
RORAP35398 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.08□□□□□ -1.76
RORAP35398 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RORAP35398 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RORAP35398 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RORAP35398 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.08□□□□□ -1.76
RORAP35398 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RORAP35398 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RORAP35398 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RORAP35398 SNORD74.4-201ENST00000364129 80 ntBASIC4.07□□□□□ -1.76
RORAP35398 U3.15-201ENST00000365398 212 ntBASIC4.07□□□□□ -1.76
RORAP35398 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RORAP35398 RNU6-532P-201ENST00000384318 107 ntBASIC4.07□□□□□ -1.76
RORAP35398 MIR7-1-201ENST00000384871 110 ntBASIC4.07□□□□□ -1.76
RORAP35398 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.07□□□□□ -1.76
RORAP35398 AL391219.1-201ENST00000422570 483 ntBASIC4.07□□□□□ -1.76
RORAP35398 EIF1P3-201ENST00000423841 334 ntBASIC4.07□□□□□ -1.76
RORAP35398 RPEP2-201ENST00000432149 701 ntBASIC4.07□□□□□ -1.76
RORAP35398 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.07□□□□□ -1.76
RORAP35398 RPL5P13-201ENST00000462840 709 ntBASIC4.07□□□□□ -1.76
RORAP35398 RPS7P7-201ENST00000463499 571 ntBASIC4.07□□□□□ -1.76
RORAP35398 AC006511.1-201ENST00000470614 315 ntBASIC4.07□□□□□ -1.76
RORAP35398 PPBPP1-201ENST00000510807 373 ntBASIC4.07□□□□□ -1.76
RORAP35398 RNU6-751P-201ENST00000516382 101 ntBASIC4.07□□□□□ -1.76
RORAP35398 RNA5SP519-201ENST00000516480 119 ntBASIC4.07□□□□□ -1.76
RORAP35398 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.07□□□□□ -1.76
RORAP35398 AC022784.5-201ENST00000522241 437 ntBASIC4.07□□□□□ -1.76
RORAP35398 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.07□□□□□ -1.76
RORAP35398 AC135001.1-201ENST00000544546 283 ntBASIC4.07□□□□□ -1.76
RORAP35398 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.07□□□□□ -1.76
RORAP35398 TVP23BP1-201ENST00000557500 617 ntBASIC4.07□□□□□ -1.76
RORAP35398 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RORAP35398 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.07□□□□□ -1.76
RORAP35398 AC083899.3-201ENST00000603413 594 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms