Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC024060.1-201ENST00000607052 494 ntBASIC5.12□□□□□ -1.59
CIITAP33076 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.12□□□□□ -1.59
CIITAP33076 AC093783.1-201ENST00000612976 329 ntBASIC5.12□□□□□ -1.59
CIITAP33076 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.12□□□□□ -1.59
CIITAP33076 AC010435.1-201ENST00000623353 1177 ntBASIC5.12□□□□□ -1.59
CIITAP33076 AC024023.1-201ENST00000624530 922 ntBASIC5.12□□□□□ -1.59
CIITAP33076 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CIITAP33076 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CIITAP33076 AC120338.1-201ENST00000625074 1541 ntBASIC5.12□□□□□ -1.59
CIITAP33076 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CIITAP33076 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
CIITAP33076 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.11□□□□□ -1.59
CIITAP33076 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CIITAP33076 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CIITAP33076 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CIITAP33076 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.11□□□□□ -1.59
CIITAP33076 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CIITAP33076 RNA5SP443-201ENST00000363083 132 ntBASIC5.11□□□□□ -1.59
CIITAP33076 RNA5SP151-201ENST00000365632 117 ntBASIC5.11□□□□□ -1.59
CIITAP33076 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CIITAP33076 MIR513B-201ENST00000385136 84 ntBASIC5.11□□□□□ -1.59
CIITAP33076 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.11□□□□□ -1.59
CIITAP33076 AC048351.1-201ENST00000420064 602 ntBASIC5.11□□□□□ -1.59
CIITAP33076 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.11□□□□□ -1.59
CIITAP33076 AL356387.2-201ENST00000422272 243 ntBASIC5.11□□□□□ -1.59
CIITAP33076 RPL7P34-201ENST00000433316 712 ntBASIC5.11□□□□□ -1.59
CIITAP33076 VN1R25P-201ENST00000443385 738 ntBASIC5.11□□□□□ -1.59
CIITAP33076 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.11□□□□□ -1.59
CIITAP33076 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CIITAP33076 AC096992.1-201ENST00000459808 709 ntBASIC5.11□□□□□ -1.59
CIITAP33076 AC053481.1-201ENST00000467217 306 ntBASIC5.11□□□□□ -1.59
CIITAP33076 AC006463.2-201ENST00000473326 348 ntBASIC5.11□□□□□ -1.59
CIITAP33076 RPL23AP37-201ENST00000479658 549 ntBASIC5.11□□□□□ -1.59
CIITAP33076 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.11□□□□□ -1.59
CIITAP33076 AC005351.1-201ENST00000511152 786 ntBASIC5.11□□□□□ -1.59
CIITAP33076 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.11□□□□□ -1.59
CIITAP33076 MRPS36P3-201ENST00000519284 130 ntBASIC5.11□□□□□ -1.59
CIITAP33076 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.11□□□□□ -1.59
CIITAP33076 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CIITAP33076 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.11□□□□□ -1.59
CIITAP33076 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.11□□□□□ -1.59
CIITAP33076 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.11□□□□□ -1.59
CIITAP33076 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.11□□□□□ -1.59
CIITAP33076 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.11□□□□□ -1.59
CIITAP33076 AC090181.2-201ENST00000602975 672 ntBASIC5.11□□□□□ -1.59
CIITAP33076 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.11□□□□□ -1.59
CIITAP33076 AC138907.10-201ENST00000623708 983 ntBASIC5.11□□□□□ -1.59
CIITAP33076 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.11□□□□□ -1.59
CIITAP33076 OR2L1P-202ENST00000641567 1023 ntBASIC5.11□□□□□ -1.59
CIITAP33076 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.11□□□□□ -1.59
CIITAP33076 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.11□□□□□ -1.59
CIITAP33076 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CIITAP33076 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CIITAP33076 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CIITAP33076 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CIITAP33076 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.11□□□□□ -1.59
CIITAP33076 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.11□□□□□ -1.59
CIITAP33076 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CIITAP33076 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CIITAP33076 RNU4-28P-201ENST00000364739 141 ntBASIC5.1□□□□□ -1.59
CIITAP33076 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
CIITAP33076 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CIITAP33076 FCF1P5-201ENST00000406490 482 ntBASIC5.1□□□□□ -1.59
CIITAP33076 RN7SKP216-201ENST00000411050 312 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.1□□□□□ -1.59
CIITAP33076 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.1□□□□□ -1.59
CIITAP33076 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.1□□□□□ -1.59
CIITAP33076 AL732292.1-201ENST00000426692 226 ntBASIC5.1□□□□□ -1.59
CIITAP33076 DNAJC19P7-201ENST00000428811 344 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.1□□□□□ -1.59
CIITAP33076 RPL7L1P1-201ENST00000448259 785 ntBASIC5.1□□□□□ -1.59
CIITAP33076 TPT1P13-201ENST00000449760 499 ntBASIC5.1□□□□□ -1.59
CIITAP33076 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 NAP1L1P3-201ENST00000462291 880 ntBASIC5.1□□□□□ -1.59
CIITAP33076 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.1□□□□□ -1.59
CIITAP33076 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.1□□□□□ -1.59
CIITAP33076 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.1□□□□□ -1.59
CIITAP33076 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.1□□□□□ -1.59
CIITAP33076 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.1□□□□□ -1.59
CIITAP33076 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.1□□□□□ -1.59
CIITAP33076 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CIITAP33076 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.1□□□□□ -1.59
CIITAP33076 UBTFL10-201ENST00000528532 562 ntBASIC5.1□□□□□ -1.59
CIITAP33076 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.1□□□□□ -1.59
CIITAP33076 AC009097.3-201ENST00000563557 1018 ntBASIC5.1□□□□□ -1.59
CIITAP33076 AC005412.1-201ENST00000580812 1049 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms