Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXC12P31275 CENPUP2-201ENST00000555897 1186 ntBASIC5.51□□□□□ -1.53
HOXC12P31275 AC051619.2-201ENST00000559063 397 ntBASIC5.51□□□□□ -1.53
HOXC12P31275 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC12P31275 LARP7P2-201ENST00000575306 125 ntBASIC5.51□□□□□ -1.53
HOXC12P31275 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC12P31275 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.51□□□□□ -1.53
HOXC12P31275 AC091193.1-201ENST00000604640 448 ntBASIC5.51□□□□□ -1.53
HOXC12P31275 AL590282.1-201ENST00000610379 1136 ntBASIC5.51□□□□□ -1.53
HOXC12P31275 AC092266.1-201ENST00000610958 165 ntBASIC5.51□□□□□ -1.53
HOXC12P31275 FAM27E2-201ENST00000619668 403 ntBASIC5.51□□□□□ -1.53
HOXC12P31275 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.51□□□□□ -1.53
HOXC12P31275 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC12P31275 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HOXC12P31275 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC12P31275 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HOXC12P31275 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC12P31275 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC12P31275 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC12P31275 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC12P31275 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC12P31275 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC12P31275 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC12P31275 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC12P31275 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC12P31275 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC12P31275 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC12P31275 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC12P31275 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
HOXC12P31275 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HOXC12P31275 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC12P31275 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
HOXC12P31275 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXC12P31275 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC12P31275 SNORA51.9-201ENST00000384295 124 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXC12P31275 EIF5P1-201ENST00000400019 1231 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 CALM2P3-201ENST00000400429 449 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXC12P31275 RNU6-195P-201ENST00000411352 109 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AL133384.1-201ENST00000412744 351 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 ISCA1P6-201ENST00000427740 390 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 RPL36P19-201ENST00000430744 301 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC12P31275 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC12P31275 AC009961.2-201ENST00000435771 251 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 ARPC3P1-201ENST00000437218 533 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.5□□□□□ -1.53
HOXC12P31275 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 AC243772.1-201ENST00000451620 410 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 MTND2P24-201ENST00000453434 806 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AC023194.2-201ENST00000465398 406 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC12P31275 RPS3AP14-201ENST00000483907 780 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 MTND1P3-201ENST00000484956 952 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 RPL12P30-201ENST00000488389 499 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AC024589.1-201ENST00000512207 263 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC12P31275 AC060775.1-201ENST00000518241 520 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC12P31275 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.5□□□□□ -1.53
HOXC12P31275 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXC12P31275 OR5AQ1P-201ENST00000527596 927 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 OR5AP1P-201ENST00000529730 940 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 CBX3P7-201ENST00000532876 502 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.5□□□□□ -1.53
HOXC12P31275 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC12P31275 ADI1P3-201ENST00000549509 470 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC12P31275 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC12P31275 AL157394.1-201ENST00000562983 1224 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC12P31275 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC12P31275 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.5□□□□□ -1.53
HOXC12P31275 BNIP3P33-201ENST00000598912 569 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AC018695.5-201ENST00000605872 315 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 AC006924.1-201ENST00000610750 559 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 TCL6_3.1-201ENST00000619064 137 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC12P31275 AC127024.6-201ENST00000621598 424 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 AL359880.1-201ENST00000621879 266 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 PISRT1-201ENST00000626175 531 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 CASC19-264ENST00000641912 1184 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 AL731556.1-201ENST00000394628 3711 ntBASIC5.5□□□□□ -1.53
HOXC12P31275 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC12P31275 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC12P31275 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC12P31275 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HOXC12P31275 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms