Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
VARSP26640 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.83□□□□□ -1.32
VARSP26640 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 Y_RNA.367-201ENST00000365544 101 ntBASIC6.83□□□□□ -1.32
VARSP26640 PPIAP26-201ENST00000377951 522 ntBASIC6.83□□□□□ -1.32
VARSP26640 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
VARSP26640 SOD2P1-201ENST00000396543 562 ntBASIC6.83□□□□□ -1.32
VARSP26640 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.83□□□□□ -1.32
VARSP26640 AL589794.1-201ENST00000424971 390 ntBASIC6.83□□□□□ -1.32
VARSP26640 BRWD1P3-201ENST00000428816 390 ntBASIC6.83□□□□□ -1.32
VARSP26640 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.83□□□□□ -1.32
VARSP26640 OR4K11P-201ENST00000431829 904 ntBASIC6.83□□□□□ -1.32
VARSP26640 RPS20P5-201ENST00000434808 360 ntBASIC6.83□□□□□ -1.32
VARSP26640 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.83□□□□□ -1.32
VARSP26640 TUBB4BP6-201ENST00000437576 479 ntBASIC6.83□□□□□ -1.32
VARSP26640 AL161722.1-201ENST00000446972 1032 ntBASIC6.83□□□□□ -1.32
VARSP26640 PCNPP5-201ENST00000452246 481 ntBASIC6.83□□□□□ -1.32
VARSP26640 RPLP0P1-201ENST00000457002 361 ntBASIC6.83□□□□□ -1.32
VARSP26640 RPSAP24-201ENST00000461543 873 ntBASIC6.83□□□□□ -1.32
VARSP26640 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.83□□□□□ -1.32
VARSP26640 AC104563.1-201ENST00000476147 376 ntBASIC6.83□□□□□ -1.32
VARSP26640 RN7SL849P-201ENST00000485236 295 ntBASIC6.83□□□□□ -1.32
VARSP26640 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.83□□□□□ -1.32
VARSP26640 AL049874.2-201ENST00000492636 288 ntBASIC6.83□□□□□ -1.32
VARSP26640 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.83□□□□□ -1.32
VARSP26640 RPS27P27-201ENST00000498779 255 ntBASIC6.83□□□□□ -1.32
VARSP26640 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC6.83□□□□□ -1.32
VARSP26640 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC6.83□□□□□ -1.32
VARSP26640 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.83□□□□□ -1.32
VARSP26640 SNORD27.1-201ENST00000516319 72 ntBASIC6.83□□□□□ -1.32
VARSP26640 RN7SKP219-201ENST00000516825 296 ntBASIC6.83□□□□□ -1.32
VARSP26640 AC087854.1-201ENST00000519706 414 ntBASIC6.83□□□□□ -1.32
VARSP26640 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.83□□□□□ -1.32
VARSP26640 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 AC023827.2-201ENST00000566880 1061 ntBASIC6.83□□□□□ -1.32
VARSP26640 OR4K8P-201ENST00000578842 1048 ntBASIC6.83□□□□□ -1.32
VARSP26640 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.83□□□□□ -1.32
VARSP26640 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.83□□□□□ -1.32
VARSP26640 AL670379.11-201ENST00000604059 253 ntBASIC6.83□□□□□ -1.32
VARSP26640 AL670379.10-201ENST00000604330 253 ntBASIC6.83□□□□□ -1.32
VARSP26640 AL670379.12-201ENST00000605291 253 ntBASIC6.83□□□□□ -1.32
VARSP26640 AL670379.9-201ENST00000605428 253 ntBASIC6.83□□□□□ -1.32
VARSP26640 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.83□□□□□ -1.32
VARSP26640 AC012409.4-201ENST00000612923 249 ntBASIC6.83□□□□□ -1.32
VARSP26640 AC015712.7-201ENST00000615211 635 ntBASIC6.83□□□□□ -1.32
VARSP26640 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.83□□□□□ -1.32
VARSP26640 AC145207.9-201ENST00000623802 325 ntBASIC6.83□□□□□ -1.32
VARSP26640 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.83□□□□□ -1.32
VARSP26640 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 KPNA2P2-201ENST00000419546 1489 ntBASIC6.83□□□□□ -1.32
VARSP26640 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 CDC27P2-201ENST00000425026 1922 ntBASIC6.83□□□□□ -1.32
VARSP26640 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.83□□□□□ -1.32
VARSP26640 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.83□□□□□ -1.32
VARSP26640 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 RBPJP6-201ENST00000411556 1431 ntBASIC6.83□□□□□ -1.32
VARSP26640 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
VARSP26640 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.83□□□□□ -1.32
VARSP26640 AL161912.4-201ENST00000623889 2468 ntBASIC6.83□□□□□ -1.32
VARSP26640 AC004972.1-201ENST00000623934 2209 ntBASIC6.82□□□□□ -1.32
VARSP26640 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARSP26640 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VARSP26640 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
VARSP26640 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.82□□□□□ -1.32
VARSP26640 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
VARSP26640 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.82□□□□□ -1.32
VARSP26640 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARSP26640 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VARSP26640 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.82□□□□□ -1.32
VARSP26640 AC032011.1-201ENST00000611703 1549 ntBASIC6.82□□□□□ -1.32
VARSP26640 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARSP26640 MAPK10-344ENST00000641718 3746 ntBASIC6.82□□□□□ -1.32
VARSP26640 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
VARSP26640 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.82□□□□□ -1.32
VARSP26640 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
VARSP26640 RNU6-1252P-201ENST00000363054 104 ntBASIC6.82□□□□□ -1.32
VARSP26640 SNORA70.5-201ENST00000365519 135 ntBASIC6.82□□□□□ -1.32
VARSP26640 SNORA19-201ENST00000384737 128 ntBASIC6.82□□□□□ -1.32
VARSP26640 FAUP2-201ENST00000394301 401 ntBASIC6.82□□□□□ -1.32
VARSP26640 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.82□□□□□ -1.32
VARSP26640 RNU6-954P-201ENST00000411355 107 ntBASIC6.82□□□□□ -1.32
VARSP26640 AL139396.1-201ENST00000421137 167 ntBASIC6.82□□□□□ -1.32
VARSP26640 AC134879.1-201ENST00000426062 394 ntBASIC6.82□□□□□ -1.32
VARSP26640 AC137499.1-201ENST00000427602 88 ntBASIC6.82□□□□□ -1.32
VARSP26640 RPL14P5-201ENST00000436474 730 ntBASIC6.82□□□□□ -1.32
VARSP26640 AF228730.2-201ENST00000438784 848 ntBASIC6.82□□□□□ -1.32
VARSP26640 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.82□□□□□ -1.32
VARSP26640 AC011742.2-201ENST00000443818 352 ntBASIC6.82□□□□□ -1.32
VARSP26640 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.82□□□□□ -1.32
VARSP26640 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.82□□□□□ -1.32
VARSP26640 TVP23CP1-201ENST00000450317 639 ntBASIC6.82□□□□□ -1.32
VARSP26640 HMGB1P7-201ENST00000450921 612 ntBASIC6.82□□□□□ -1.32
VARSP26640 AC005517.1-201ENST00000452091 489 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms