| TFE3 | P19532 | ANO4-202 | ENST00000392979 | 3909 nt | APPRIS P3 TSL 2 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | GNG2-212 | ENST00000556752 | 3424 nt | APPRIS P1 TSL 1 (best) BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC008033.1-201 | ENST00000216407 | 1162 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | CRLS1-202 | ENST00000378868 | 994 nt | TSL 5 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | U3.23-201 | ENST00000391132 | 200 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | DNAJA1P3-201 | ENST00000399417 | 1194 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | RN7SKP263-201 | ENST00000411194 | 309 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | FO393401.1-203 | ENST00000416260 | 486 nt | TSL 5 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | LINC01853-201 | ENST00000417715 | 444 nt | TSL 3 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | LINC00701-201 | ENST00000418295 | 742 nt | TSL 1 (best) BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AL589765.2-201 | ENST00000420382 | 424 nt | TSL 3 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | HNRNPA1P18-201 | ENST00000433537 | 927 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC009961.2-201 | ENST00000435771 | 251 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | ARPC3P1-201 | ENST00000437218 | 533 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC023141.8-201 | ENST00000442554 | 208 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | DPP10-AS2-201 | ENST00000446992 | 624 nt | TSL 5 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | NUTM2A-AS1-209 | ENST00000447424 | 571 nt | TSL 3 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AL354754.1-201 | ENST00000449730 | 625 nt | TSL 3 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC246785.3-201 | ENST00000455105 | 314 nt | TSL 5 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AL122020.1-201 | ENST00000472287 | 459 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | UBFD1P1-201 | ENST00000473259 | 814 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | RPL21P6-201 | ENST00000479171 | 504 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC015468.3-201 | ENST00000518967 | 417 nt | TSL 2 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | LINC01033-204 | ENST00000523194 | 715 nt | TSL 2 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AP000424.2-201 | ENST00000523784 | 233 nt | TSL 3 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC026894.1-201 | ENST00000532930 | 850 nt | TSL 3 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC027018.1-201 | ENST00000533978 | 396 nt | TSL 4 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC008083.3-201 | ENST00000547777 | 329 nt | TSL 3 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | SLC12A1-210 | ENST00000561031 | 735 nt | TSL 2 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AL589935.1-223 | ENST00000587015 | 808 nt | TSL 5 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | SNHG8-202 | ENST00000602483 | 309 nt | TSL 3 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC027243.2-201 | ENST00000602530 | 724 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC243654.2-201 | ENST00000612843 | 443 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | MLECP1-201 | ENST00000615893 | 709 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC245187.2-201 | ENST00000631520 | 475 nt | TSL 3 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | 5S_rRNA.28-201 | ENST00000638107 | 119 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AP002512.4-202 | ENST00000641599 | 4530 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | LRRC37A3-204 | ENST00000400877 | 3273 nt | TSL 2 BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | PWAR1-201 | ENST00000624188 | 2414 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | MSR1-204 | ENST00000381998 | 2826 nt | TSL 1 (best) BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | LGI1-202 | ENST00000371418 | 2381 nt | APPRIS P1 TSL 1 (best) BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | WDR17-201 | ENST00000280190 | 4705 nt | APPRIS P3 TSL 1 (best) BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | AC019072.1-201 | ENST00000604535 | 1551 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | ZNF402P-201 | ENST00000404435 | 3100 nt | BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | TTC39C-201 | ENST00000304621 | 2304 nt | APPRIS P3 TSL 1 (best) BASIC | 6.09 | □□□□□ -1.43 | | |
| TFE3 | P19532 | ZNF347-202 | ENST00000452676 | 4553 nt | APPRIS ALT2 TSL 2 BASIC | 6.09 | □□□□□ -1.44 | | |
| TFE3 | P19532 | LINC01361-202 | ENST00000452834 | 1526 nt | TSL 1 (best) BASIC | 6.09 | □□□□□ -1.44 | | |
| TFE3 | P19532 | MSL3P1-202 | ENST00000440028 | 1468 nt | BASIC | 6.09 | □□□□□ -1.44 | | |
| TFE3 | P19532 | SV2B-201 | ENST00000330276 | 11202 nt | APPRIS P1 TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AL022578.1-201 | ENST00000439330 | 1433 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | SMCO3-201 | ENST00000316048 | 2104 nt | APPRIS P1 TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | CEP112-204 | ENST00000537949 | 2847 nt | TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | CAPRIN2-203 | ENST00000417045 | 3535 nt | TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | ZNF66-201 | ENST00000344519 | 1745 nt | APPRIS P1 TSL 3 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | CEP85L-201 | ENST00000360290 | 1736 nt | TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | CASC19-280 | ENST00000642102 | 1351 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | UGT2A1-206 | ENST00000514019 | 2376 nt | TSL 2 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | PRLR-201 | ENST00000231423 | 1679 nt | TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | RPS4Y1-201 | ENST00000250784 | 1305 nt | APPRIS P1 TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AP004607.3-201 | ENST00000530354 | 3915 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | DDAH1-204 | ENST00000535924 | 3909 nt | TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | FBXO9-201 | ENST00000244426 | 4559 nt | TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | BICRAL-202 | ENST00000394168 | 6515 nt | APPRIS P1 TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | TERB1-203 | ENST00000558713 | 2257 nt | APPRIS P1 TSL 5 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | SPATA1-206 | ENST00000490879 | 2888 nt | APPRIS P1 TSL 5 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | RPL6-201 | ENST00000202773 | 947 nt | APPRIS P1 TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | CBX3P1-201 | ENST00000325243 | 554 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | RNU6-181P-201 | ENST00000363225 | 107 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | RNY4P34-201 | ENST00000364779 | 95 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | PKIB-203 | ENST00000368446 | 556 nt | TSL 2 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | RNU6-769P-201 | ENST00000384407 | 104 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | SNORD115.1-201 | ENST00000391109 | 76 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | PEX12P1-201 | ENST00000400284 | 1048 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | HSD17B7P1-201 | ENST00000412419 | 1017 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | OR51A5P-201 | ENST00000415429 | 942 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | SPA17P1-201 | ENST00000416656 | 452 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | BX295541.1-201 | ENST00000417774 | 250 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AL391097.2-201 | ENST00000435057 | 485 nt | TSL 3 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AC073410.1-201 | ENST00000435125 | 589 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | TUBB4BP6-201 | ENST00000437576 | 479 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | DNAJC19P5-201 | ENST00000443295 | 316 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | RGS5-217 | ENST00000451759 | 835 nt | TSL 3 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | LINC01546-201 | ENST00000457435 | 674 nt | TSL 2 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | NCOR1P1-201 | ENST00000478176 | 406 nt | TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AC006539.1-201 | ENST00000481419 | 501 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AC069439.1-201 | ENST00000494739 | 167 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AC092916.1-201 | ENST00000497896 | 411 nt | TSL 3 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AC034234.1-201 | ENST00000502993 | 465 nt | TSL 3 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | CSN1S1-202 | ENST00000505782 | 871 nt | APPRIS ALT2 TSL 5 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | CSN1S1-204 | ENST00000507772 | 895 nt | APPRIS ALT2 TSL 5 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AC097460.1-201 | ENST00000514624 | 590 nt | TSL 3 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | HAND2-AS1-235 | ENST00000515376 | 951 nt | TSL 3 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | RNU6-358P-201 | ENST00000516564 | 75 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | RN7SKP70-201 | ENST00000516655 | 271 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | RN7SKP96-201 | ENST00000516948 | 297 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | GLYATL1P2-201 | ENST00000529451 | 510 nt | TSL 2 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | PAFAH1B2-206 | ENST00000530272 | 850 nt | TSL 1 (best) BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | ZNF84-205 | ENST00000535439 | 647 nt | TSL 5 BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AL121594.2-201 | ENST00000541658 | 472 nt | BASIC | 6.08 | □□□□□ -1.44 | | |
| TFE3 | P19532 | AC007569.1-202 | ENST00000547282 | 303 nt | TSL 3 BASIC | 6.08 | □□□□□ -1.44 | | |