Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.15□□□□□ -1.43
ATF3P18847 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ATF3P18847 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.15□□□□□ -1.43
ATF3P18847 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ATF3P18847 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATF3P18847 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.14□□□□□ -1.43
ATF3P18847 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATF3P18847 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
ATF3P18847 AC073055.1-201ENST00000456901 1621 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AC092162.3-201ENST00000624511 1624 ntBASIC6.14□□□□□ -1.43
ATF3P18847 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.14□□□□□ -1.43
ATF3P18847 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATF3P18847 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF3P18847 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.14□□□□□ -1.43
ATF3P18847 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
ATF3P18847 OR51H2P-202ENST00000641424 3046 ntBASIC6.14□□□□□ -1.43
ATF3P18847 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC6.14□□□□□ -1.43
ATF3P18847 BX005019.1-201ENST00000561881 1810 ntBASIC6.14□□□□□ -1.43
ATF3P18847 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF3P18847 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF3P18847 RNU6-317P-201ENST00000384031 107 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AC106883.1-201ENST00000418805 562 ntBASIC6.14□□□□□ -1.43
ATF3P18847 PDSS1P1-201ENST00000422953 1114 ntBASIC6.14□□□□□ -1.43
ATF3P18847 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.14□□□□□ -1.43
ATF3P18847 OR8F1P-201ENST00000425243 930 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF3P18847 AL445584.1-201ENST00000431451 330 ntBASIC6.14□□□□□ -1.43
ATF3P18847 NPM1P18-201ENST00000434232 732 ntBASIC6.14□□□□□ -1.43
ATF3P18847 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.14□□□□□ -1.43
ATF3P18847 AC068135.1-201ENST00000446164 246 ntBASIC6.14□□□□□ -1.43
ATF3P18847 OR51B8P-201ENST00000449892 769 ntBASIC6.14□□□□□ -1.43
ATF3P18847 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ATF3P18847 TPT1P1-201ENST00000458495 518 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AC005912.1-201ENST00000495392 255 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AC008565.1-201ENST00000509046 885 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF3P18847 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATF3P18847 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF3P18847 RN7SL339P-201ENST00000580597 296 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AC027449.1-201ENST00000608890 407 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AC091953.5-201ENST00000622919 233 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AC012442.3-202ENST00000636742 206 ntBASIC6.14□□□□□ -1.43
ATF3P18847 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.14□□□□□ -1.43
ATF3P18847 AC009313.2-201ENST00000417893 1941 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF3P18847 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AC006042.3-201ENST00000454684 1469 ntBASIC6.14□□□□□ -1.43
ATF3P18847 AL022322.2-201ENST00000624072 20397 ntBASIC6.14□□□□□ -1.43
ATF3P18847 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF3P18847 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATF3P18847 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATF3P18847 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.13□□□□□ -1.43
ATF3P18847 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATF3P18847 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATF3P18847 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
ATF3P18847 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATF3P18847 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.13□□□□□ -1.43
ATF3P18847 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATF3P18847 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.13□□□□□ -1.43
ATF3P18847 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
ATF3P18847 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATF3P18847 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATF3P18847 RNA5SP453-201ENST00000362503 119 ntBASIC6.13□□□□□ -1.43
ATF3P18847 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.13□□□□□ -1.43
ATF3P18847 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.13□□□□□ -1.43
ATF3P18847 U3.35-201ENST00000408405 208 ntBASIC6.13□□□□□ -1.43
ATF3P18847 AC092745.2-202ENST00000411880 369 ntBASIC6.13□□□□□ -1.43
ATF3P18847 RPL6P29-201ENST00000414863 865 ntBASIC6.13□□□□□ -1.43
ATF3P18847 LIPT1P1-201ENST00000415870 1186 ntBASIC6.13□□□□□ -1.43
ATF3P18847 AC021876.1-201ENST00000425959 359 ntBASIC6.13□□□□□ -1.43
ATF3P18847 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.13□□□□□ -1.43
ATF3P18847 CBX1P4-201ENST00000439415 457 ntBASIC6.13□□□□□ -1.43
ATF3P18847 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.13□□□□□ -1.43
ATF3P18847 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.13□□□□□ -1.43
ATF3P18847 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC6.13□□□□□ -1.43
ATF3P18847 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.13□□□□□ -1.43
ATF3P18847 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC6.13□□□□□ -1.43
ATF3P18847 AC104164.3-201ENST00000467363 1258 ntBASIC6.13□□□□□ -1.43
ATF3P18847 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.13□□□□□ -1.43
ATF3P18847 TRAV31-201ENST00000502780 342 ntBASIC6.13□□□□□ -1.43
ATF3P18847 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.13□□□□□ -1.43
ATF3P18847 AC104108.1-201ENST00000509930 412 ntBASIC6.13□□□□□ -1.43
ATF3P18847 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ATF3P18847 AC105031.1-201ENST00000518550 476 ntBASIC6.13□□□□□ -1.43
ATF3P18847 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.13□□□□□ -1.43
ATF3P18847 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.13□□□□□ -1.43
ATF3P18847 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.13□□□□□ -1.43
ATF3P18847 AC021451.1-201ENST00000523498 1129 ntBASIC6.13□□□□□ -1.43
ATF3P18847 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.13□□□□□ -1.43
ATF3P18847 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.13□□□□□ -1.43
ATF3P18847 AL022067.1-201ENST00000602426 454 ntBASIC6.13□□□□□ -1.43
ATF3P18847 MIR6891-201ENST00000618788 93 ntBASIC6.13□□□□□ -1.43
ATF3P18847 TRIM51GP-201ENST00000534741 1350 ntBASIC6.13□□□□□ -1.43
ATF3P18847 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.13□□□□□ -1.43
ATF3P18847 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.13□□□□□ -1.43
ATF3P18847 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.13□□□□□ -1.43
ATF3P18847 AC004656.1-201ENST00000568479 4951 ntBASIC6.13□□□□□ -1.43
ATF3P18847 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATF3P18847 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ATF3P18847 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms