Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TPM1P09493 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TPM1P09493 AC092642.1-201ENST00000392417 425 ntBASIC4.4□□□□□ -1.71
TPM1P09493 RPL23AP26-201ENST00000412728 464 ntBASIC4.4□□□□□ -1.71
TPM1P09493 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.4□□□□□ -1.71
TPM1P09493 AL159169.1-201ENST00000421119 127 ntBASIC4.4□□□□□ -1.71
TPM1P09493 RPL7P53-201ENST00000421245 739 ntBASIC4.4□□□□□ -1.71
TPM1P09493 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.4□□□□□ -1.71
TPM1P09493 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.4□□□□□ -1.71
TPM1P09493 AC092809.1-201ENST00000441469 474 ntBASIC4.4□□□□□ -1.71
TPM1P09493 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.4□□□□□ -1.71
TPM1P09493 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TPM1P09493 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.4□□□□□ -1.71
TPM1P09493 RNA5SP246-201ENST00000458909 119 ntBASIC4.4□□□□□ -1.71
TPM1P09493 RN7SL177P-201ENST00000476596 299 ntBASIC4.4□□□□□ -1.71
TPM1P09493 AC004069.2-201ENST00000505438 1114 ntBASIC4.4□□□□□ -1.71
TPM1P09493 AC008958.1-201ENST00000511047 682 ntBASIC4.4□□□□□ -1.71
TPM1P09493 RN7SKP92-201ENST00000517266 244 ntBASIC4.4□□□□□ -1.71
TPM1P09493 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.4□□□□□ -1.71
TPM1P09493 AC010476.1-201ENST00000519111 851 ntBASIC4.4□□□□□ -1.71
TPM1P09493 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.4□□□□□ -1.71
TPM1P09493 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.4□□□□□ -1.71
TPM1P09493 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.4□□□□□ -1.71
TPM1P09493 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TPM1P09493 AC063949.1-201ENST00000552900 865 ntBASIC4.4□□□□□ -1.71
TPM1P09493 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.4□□□□□ -1.71
TPM1P09493 AL133457.1-201ENST00000564251 987 ntBASIC4.4□□□□□ -1.71
TPM1P09493 MIR5684-201ENST00000585074 65 ntBASIC4.4□□□□□ -1.71
TPM1P09493 AC211433.2-201ENST00000608433 387 ntBASIC4.4□□□□□ -1.71
TPM1P09493 AL391261.4-201ENST00000616012 481 ntBASIC4.4□□□□□ -1.71
TPM1P09493 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.4□□□□□ -1.71
TPM1P09493 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.4□□□□□ -1.71
TPM1P09493 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TPM1P09493 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TPM1P09493 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.4□□□□□ -1.71
TPM1P09493 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TPM1P09493 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TPM1P09493 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TPM1P09493 AC100871.1-201ENST00000507871 1456 ntBASIC4.39□□□□□ -1.71
TPM1P09493 XIAPP3-201ENST00000312918 795 ntBASIC4.39□□□□□ -1.71
TPM1P09493 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TPM1P09493 RPS16P5-201ENST00000406501 404 ntBASIC4.39□□□□□ -1.71
TPM1P09493 RPL7AP73-201ENST00000413490 353 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.39□□□□□ -1.71
TPM1P09493 AL358472.1-201ENST00000431295 329 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AC006466.1-201ENST00000438721 289 ntBASIC4.39□□□□□ -1.71
TPM1P09493 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.39□□□□□ -1.71
TPM1P09493 TXNP2-201ENST00000443918 295 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AL157884.3-201ENST00000448273 1184 ntBASIC4.39□□□□□ -1.71
TPM1P09493 FCF1P7-201ENST00000451185 558 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AC009963.2-201ENST00000453431 138 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AL513533.1-201ENST00000453728 415 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AC018638.3-201ENST00000461273 132 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AC018635.1-201ENST00000468292 1030 ntBASIC4.39□□□□□ -1.71
TPM1P09493 SEPT7P6-201ENST00000469999 1143 ntBASIC4.39□□□□□ -1.71
TPM1P09493 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.39□□□□□ -1.71
TPM1P09493 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.39□□□□□ -1.71
TPM1P09493 KRT19P6-201ENST00000510983 209 ntBASIC4.39□□□□□ -1.71
TPM1P09493 SNORA70.14-201ENST00000516205 110 ntBASIC4.39□□□□□ -1.71
TPM1P09493 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.39□□□□□ -1.71
TPM1P09493 MTND1P6-201ENST00000523621 946 ntBASIC4.39□□□□□ -1.71
TPM1P09493 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.39□□□□□ -1.71
TPM1P09493 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.39□□□□□ -1.71
TPM1P09493 NPM1P47-201ENST00000560843 856 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AC010615.3-201ENST00000597319 394 ntBASIC4.39□□□□□ -1.71
TPM1P09493 BMS1P7-201ENST00000602440 1052 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AC020910.2-201ENST00000603635 610 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AP005212.4-201ENST00000614206 710 ntBASIC4.39□□□□□ -1.71
TPM1P09493 AL139089.1-201ENST00000620372 975 ntBASIC4.39□□□□□ -1.71
TPM1P09493 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.39□□□□□ -1.71
TPM1P09493 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
TPM1P09493 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TPM1P09493 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TPM1P09493 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
TPM1P09493 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TPM1P09493 EXOC5P1-201ENST00000510543 1969 ntBASIC4.38□□□□□ -1.71
TPM1P09493 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.38□□□□□ -1.71
TPM1P09493 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
TPM1P09493 AC053481.2-202ENST00000582394 1500 ntBASIC4.38□□□□□ -1.71
TPM1P09493 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
TPM1P09493 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TPM1P09493 MIR550A3-201ENST00000390735 95 ntBASIC4.38□□□□□ -1.71
TPM1P09493 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.38□□□□□ -1.71
TPM1P09493 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.38□□□□□ -1.71
TPM1P09493 RPL30P2-201ENST00000414021 291 ntBASIC4.38□□□□□ -1.71
TPM1P09493 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.38□□□□□ -1.71
TPM1P09493 AC127526.1-201ENST00000417526 366 ntBASIC4.38□□□□□ -1.71
TPM1P09493 RPA2P2-201ENST00000419698 796 ntBASIC4.38□□□□□ -1.71
TPM1P09493 RPL23AP1-201ENST00000428990 471 ntBASIC4.38□□□□□ -1.71
TPM1P09493 RPS3AP54-201ENST00000435535 734 ntBASIC4.38□□□□□ -1.71
TPM1P09493 HMGB1P37-201ENST00000439613 609 ntBASIC4.38□□□□□ -1.71
TPM1P09493 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.38□□□□□ -1.71
TPM1P09493 RPL31P53-201ENST00000457065 348 ntBASIC4.38□□□□□ -1.71
TPM1P09493 RPL23AP24-201ENST00000458203 385 ntBASIC4.38□□□□□ -1.71
TPM1P09493 RPL38P1-201ENST00000460914 211 ntBASIC4.38□□□□□ -1.71
TPM1P09493 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.38□□□□□ -1.71
TPM1P09493 AC117394.1-201ENST00000477323 567 ntBASIC4.38□□□□□ -1.71
TPM1P09493 RPS23P1-201ENST00000491662 432 ntBASIC4.38□□□□□ -1.71
TPM1P09493 IGBP1P5-201ENST00000507524 1000 ntBASIC4.38□□□□□ -1.71
TPM1P09493 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms