Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 MIR423-201ENST00000362201 94 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 RNU6-244P-201ENST00000391028 104 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 Y_RNA.625-201ENST00000411256 107 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 RPL26P37-201ENST00000411983 438 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 RPL23AP26-201ENST00000412728 464 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 OR6K4P-201ENST00000423179 955 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 CHIAP3-201ENST00000423668 1133 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AL606490.7-201ENST00000433136 191 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC092809.1-201ENST00000441469 474 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC009220.1-201ENST00000451614 275 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AF213884.1-201ENST00000488102 463 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC004069.2-201ENST00000505438 1114 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC108475.1-201ENST00000507880 950 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 HPRT1P1-201ENST00000509498 657 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 PGBD4P4-201ENST00000509673 613 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 KCTD9P2-201ENST00000512203 1013 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 RNU6-1308P-201ENST00000516817 103 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC012414.2-201ENST00000559474 187 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AL451044.1-201ENST00000604867 238 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC084036.1-201ENST00000609190 508 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AL445423.1-201ENST00000609941 536 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AC145207.9-201ENST00000623802 325 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 SPATA2P1-201ENST00000431223 2055 ntBASIC3.61□□□□□ -1.83
HLA-DPB1P04440 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPB1P04440 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 RN7SKP224-201ENST00000364140 325 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 RNA5SP366-201ENST00000365454 123 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 RNU6-532P-201ENST00000384318 107 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 MIR141-201ENST00000384975 95 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 RHEBP3-201ENST00000411920 351 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 BTF3P9-201ENST00000418784 283 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 GAPDHP49-201ENST00000421421 961 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AL445528.1-201ENST00000426330 420 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AC239809.1-201ENST00000450470 217 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AC109327.1-201ENST00000471666 403 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 NDUFA5P9-201ENST00000472609 340 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AC105137.1-201ENST00000484355 562 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 RPL29P14-201ENST00000495837 428 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AC016550.3-201ENST00000515706 767 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 RNU6-347P-201ENST00000516658 105 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AL133457.1-201ENST00000564251 987 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AC022968.1-201ENST00000567372 442 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 KPNA2P3-201ENST00000584190 848 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 MIR3138-201ENST00000585238 82 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AF230666.2-201ENST00000602328 725 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AL139286.1-201ENST00000604465 483 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AC078899.5-201ENST00000612475 178 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 MLECP1-201ENST00000615893 709 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AL591424.2-201ENST00000617023 128 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AP002967.1-201ENST00000624203 539 ntBASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
HLA-DPB1P04440 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms