Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL591424.2-201ENST00000617023 128 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.59□□□□□ -1.67
COL1A1P02452 AC079298.2-201ENST00000623885 459 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 MTCO1P12-201ENST00000414273 1543 ntBASIC4.59□□□□□ -1.67
COL1A1P02452 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL1A1P02452 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
COL1A1P02452 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.59□□□□□ -1.68
COL1A1P02452 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
COL1A1P02452 AL031595.2-201ENST00000624215 19071 ntBASIC4.59□□□□□ -1.68
COL1A1P02452 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.59□□□□□ -1.68
COL1A1P02452 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL1A1P02452 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL1A1P02452 AC074029.4-201ENST00000624796 1859 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.58□□□□□ -1.68
COL1A1P02452 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.58□□□□□ -1.68
COL1A1P02452 AL442128.2-201ENST00000620246 1824 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 NAMPTP1-201ENST00000440465 2514 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL1A1P02452 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL1A1P02452 MIR93-201ENST00000385024 80 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 MIR513A2-201ENST00000385249 127 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.58□□□□□ -1.68
COL1A1P02452 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.58□□□□□ -1.68
COL1A1P02452 PPIAP3-201ENST00000450588 505 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 AC026427.2-201ENST00000506228 536 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.58□□□□□ -1.68
COL1A1P02452 OR4A12P-201ENST00000530847 918 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.58□□□□□ -1.68
COL1A1P02452 RPL21P12-201ENST00000559810 515 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 AC090877.1-201ENST00000561418 344 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.58□□□□□ -1.68
COL1A1P02452 AC015722.2-201ENST00000622210 551 ntBASIC4.58□□□□□ -1.68
COL1A1P02452 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
COL1A1P02452 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL1A1P02452 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL1A1P02452 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.58□□□□□ -1.68
COL1A1P02452 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL1A1P02452 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL1A1P02452 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL1A1P02452 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL1A1P02452 AL035425.3-201ENST00000564206 4996 ntBASIC4.57□□□□□ -1.68
COL1A1P02452 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
COL1A1P02452 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
COL1A1P02452 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL1A1P02452 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL1A1P02452 UBE3AP2-201ENST00000429033 2259 ntBASIC4.57□□□□□ -1.68
COL1A1P02452 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL1A1P02452 BOLA3P4-201ENST00000418151 400 ntBASIC4.57□□□□□ -1.68
COL1A1P02452 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 OR2X1P-201ENST00000421144 687 ntBASIC4.57□□□□□ -1.68
COL1A1P02452 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.57□□□□□ -1.68
COL1A1P02452 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.57□□□□□ -1.68
COL1A1P02452 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.57□□□□□ -1.68
COL1A1P02452 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.57□□□□□ -1.68
COL1A1P02452 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.57□□□□□ -1.68
COL1A1P02452 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 AC020914.6-201ENST00000594327 272 ntBASIC4.57□□□□□ -1.68
COL1A1P02452 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.57□□□□□ -1.68
COL1A1P02452 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL1A1P02452 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL1A1P02452 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL1A1P02452 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
COL1A1P02452 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL1A1P02452 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.56□□□□□ -1.68
COL1A1P02452 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL1A1P02452 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL1A1P02452 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL1A1P02452 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.56□□□□□ -1.68
COL1A1P02452 OR51A6P-201ENST00000418680 1004 ntBASIC4.56□□□□□ -1.68
COL1A1P02452 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.56□□□□□ -1.68
COL1A1P02452 CYCSP4-201ENST00000429682 331 ntBASIC4.56□□□□□ -1.68
COL1A1P02452 TPTE2P3-201ENST00000441562 1189 ntBASIC4.56□□□□□ -1.68
COL1A1P02452 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.56□□□□□ -1.68
COL1A1P02452 ELOCP35-201ENST00000604289 336 ntBASIC4.56□□□□□ -1.68
COL1A1P02452 AL390816.3-201ENST00000604527 1066 ntBASIC4.56□□□□□ -1.68
COL1A1P02452 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.56□□□□□ -1.68
COL1A1P02452 OR2BH1P-201ENST00000608850 864 ntBASIC4.56□□□□□ -1.68
COL1A1P02452 AC244517.3-201ENST00000616254 1235 ntBASIC4.56□□□□□ -1.68
COL1A1P02452 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.56□□□□□ -1.68
COL1A1P02452 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.56□□□□□ -1.68
COL1A1P02452 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL1A1P02452 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL1A1P02452 AC005261.6-201ENST00000623072 1387 ntBASIC4.56□□□□□ -1.68
COL1A1P02452 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL1A1P02452 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL1A1P02452 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL1A1P02452 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL1A1P02452 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL1A1P02452 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL1A1P02452 AC234772.1-201ENST00000377927 937 ntBASIC4.56□□□□□ -1.68
COL1A1P02452 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL1A1P02452 CBX1P3-201ENST00000413296 527 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms