Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC128687.2-201ENST00000609657 566 ntBASIC3.76□□□□□ -1.81
TNFP01375 AC015813.4-201ENST00000610469 179 ntBASIC3.76□□□□□ -1.81
TNFP01375 AC067931.1-201ENST00000624190 671 ntBASIC3.76□□□□□ -1.81
TNFP01375 AC063923.1-201ENST00000478982 1619 ntBASIC3.76□□□□□ -1.81
TNFP01375 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFP01375 ZNF285B-201ENST00000561698 1767 ntBASIC3.76□□□□□ -1.81
TNFP01375 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TNFP01375 MTND4P26-201ENST00000415971 1359 ntBASIC3.76□□□□□ -1.81
TNFP01375 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
TNFP01375 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFP01375 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFP01375 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFP01375 AC024560.2-201ENST00000507981 1497 ntBASIC3.75□□□□□ -1.81
TNFP01375 AL450326.2-201ENST00000421913 1962 ntBASIC3.75□□□□□ -1.81
TNFP01375 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TNFP01375 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
TNFP01375 MIR449B-201ENST00000384995 97 ntBASIC3.75□□□□□ -1.81
TNFP01375 AL390879.2-203ENST00000426943 1121 ntBASIC3.75□□□□□ -1.81
TNFP01375 RPL37P1-201ENST00000432310 284 ntBASIC3.75□□□□□ -1.81
TNFP01375 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TNFP01375 AL358232.1-201ENST00000448030 501 ntBASIC3.75□□□□□ -1.81
TNFP01375 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TNFP01375 AC108941.1-201ENST00000502853 530 ntBASIC3.75□□□□□ -1.81
TNFP01375 PDCD5P1-201ENST00000543528 309 ntBASIC3.75□□□□□ -1.81
TNFP01375 AC053481.3-201ENST00000577881 843 ntBASIC3.75□□□□□ -1.81
TNFP01375 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.75□□□□□ -1.81
TNFP01375 MIR5187-201ENST00000583479 76 ntBASIC3.75□□□□□ -1.81
TNFP01375 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFP01375 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFP01375 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TNFP01375 AL049634.3-201ENST00000604968 457 ntBASIC3.75□□□□□ -1.81
TNFP01375 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TNFP01375 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFP01375 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TNFP01375 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFP01375 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFP01375 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.74□□□□□ -1.81
TNFP01375 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFP01375 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFP01375 AC106871.1-201ENST00000568324 3102 ntBASIC3.74□□□□□ -1.81
TNFP01375 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFP01375 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TNFP01375 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFP01375 MIR448-201ENST00000362131 111 ntBASIC3.74□□□□□ -1.81
TNFP01375 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.74□□□□□ -1.81
TNFP01375 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TNFP01375 RPL21P17-201ENST00000397467 475 ntBASIC3.74□□□□□ -1.81
TNFP01375 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.74□□□□□ -1.81
TNFP01375 AL035423.1-201ENST00000420331 213 ntBASIC3.74□□□□□ -1.81
TNFP01375 IPMKP1-201ENST00000425988 855 ntBASIC3.74□□□□□ -1.81
TNFP01375 AL451062.2-201ENST00000427515 271 ntBASIC3.74□□□□□ -1.81
TNFP01375 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFP01375 AC096638.2-201ENST00000434965 711 ntBASIC3.74□□□□□ -1.81
TNFP01375 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFP01375 FGF7P3-201ENST00000454645 303 ntBASIC3.74□□□□□ -1.81
TNFP01375 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.74□□□□□ -1.81
TNFP01375 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFP01375 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.74□□□□□ -1.81
TNFP01375 RPL7P24-201ENST00000493052 752 ntBASIC3.74□□□□□ -1.81
TNFP01375 RPL31P61-201ENST00000496160 376 ntBASIC3.74□□□□□ -1.81
TNFP01375 UBE2CP3-201ENST00000502715 450 ntBASIC3.74□□□□□ -1.81
TNFP01375 MTND5P12-201ENST00000502851 1449 ntBASIC3.74□□□□□ -1.81
TNFP01375 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.74□□□□□ -1.81
TNFP01375 AC026726.1-201ENST00000512859 601 ntBASIC3.74□□□□□ -1.81
TNFP01375 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFP01375 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.74□□□□□ -1.81
TNFP01375 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFP01375 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.74□□□□□ -1.81
TNFP01375 AL356121.2-201ENST00000624715 780 ntBASIC3.74□□□□□ -1.81
TNFP01375 AL034408.1-202ENST00000636088 415 ntBASIC3.74□□□□□ -1.81
TNFP01375 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFP01375 AC097504.1-201ENST00000515103 2415 ntBASIC3.74□□□□□ -1.81
TNFP01375 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.74□□□□□ -1.81
TNFP01375 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.74□□□□□ -1.81
TNFP01375 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TNFP01375 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.73□□□□□ -1.81
TNFP01375 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFP01375 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFP01375 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFP01375 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.73□□□□□ -1.81
TNFP01375 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFP01375 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFP01375 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TNFP01375 SNORA73.2-201ENST00000364946 201 ntBASIC3.73□□□□□ -1.81
TNFP01375 AC019155.1-201ENST00000382242 574 ntBASIC3.73□□□□□ -1.81
TNFP01375 SNORA5A-201ENST00000384111 134 ntBASIC3.73□□□□□ -1.81
TNFP01375 AC069157.1-201ENST00000421749 137 ntBASIC3.73□□□□□ -1.81
TNFP01375 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.73□□□□□ -1.81
TNFP01375 RPS12P5-201ENST00000423449 371 ntBASIC3.73□□□□□ -1.81
TNFP01375 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TNFP01375 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFP01375 RPS17P13-201ENST00000448974 407 ntBASIC3.73□□□□□ -1.81
TNFP01375 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFP01375 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFP01375 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.73□□□□□ -1.81
TNFP01375 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.73□□□□□ -1.81
TNFP01375 APOOP2-201ENST00000461561 539 ntBASIC3.73□□□□□ -1.81
TNFP01375 RPL5P30-201ENST00000465511 891 ntBASIC3.73□□□□□ -1.81
TNFP01375 AC091153.1-201ENST00000466297 402 ntBASIC3.73□□□□□ -1.81
TNFP01375 AC034236.1-201ENST00000469891 373 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms