Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.55□□□□□ -1.68
LDLRP01130 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.55□□□□□ -1.68
LDLRP01130 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.55□□□□□ -1.68
LDLRP01130 AL049838.1-201ENST00000563647 981 ntBASIC4.55□□□□□ -1.68
LDLRP01130 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.55□□□□□ -1.68
LDLRP01130 AC005412.1-201ENST00000580812 1049 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AL606834.3-201ENST00000602615 496 ntBASIC4.55□□□□□ -1.68
LDLRP01130 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.55□□□□□ -1.68
LDLRP01130 AC091979.2-201ENST00000607514 214 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AC092653.1-201ENST00000608509 531 ntBASIC4.55□□□□□ -1.68
LDLRP01130 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.55□□□□□ -1.68
LDLRP01130 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.55□□□□□ -1.68
LDLRP01130 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.55□□□□□ -1.68
LDLRP01130 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.55□□□□□ -1.68
LDLRP01130 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.55□□□□□ -1.68
LDLRP01130 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.55□□□□□ -1.68
LDLRP01130 MAPK10-263ENST00000641052 4307 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AC092079.1-201ENST00000558620 1985 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.54□□□□□ -1.68
LDLRP01130 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDLRP01130 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDLRP01130 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDLRP01130 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
LDLRP01130 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LDLRP01130 RNU5B-1-201ENST00000363286 116 ntBASIC4.54□□□□□ -1.68
LDLRP01130 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.54□□□□□ -1.68
LDLRP01130 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LDLRP01130 MIR298-201ENST00000401212 88 ntBASIC4.54□□□□□ -1.68
LDLRP01130 CYCSP10-201ENST00000417973 294 ntBASIC4.54□□□□□ -1.68
LDLRP01130 MTCO2P23-201ENST00000425216 680 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC004975.1-201ENST00000428733 208 ntBASIC4.54□□□□□ -1.68
LDLRP01130 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDLRP01130 AC000041.1-201ENST00000439655 175 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC004854.1-201ENST00000440356 349 ntBASIC4.54□□□□□ -1.68
LDLRP01130 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AL137845.2-201ENST00000444292 988 ntBASIC4.54□□□□□ -1.68
LDLRP01130 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDLRP01130 AC104651.2-201ENST00000447549 528 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.54□□□□□ -1.68
LDLRP01130 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.54□□□□□ -1.68
LDLRP01130 NUTF2P7-201ENST00000453086 375 ntBASIC4.54□□□□□ -1.68
LDLRP01130 Z95152.1-201ENST00000453556 656 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AL035407.2-201ENST00000454090 378 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.54□□□□□ -1.68
LDLRP01130 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.54□□□□□ -1.68
LDLRP01130 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC111193.1-201ENST00000504097 155 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC093824.1-201ENST00000508796 343 ntBASIC4.54□□□□□ -1.68
LDLRP01130 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDLRP01130 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.54□□□□□ -1.68
LDLRP01130 AC119751.5-201ENST00000514077 770 ntBASIC4.54□□□□□ -1.68
LDLRP01130 RNA5SP43-201ENST00000516559 110 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC010376.1-201ENST00000522101 334 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.54□□□□□ -1.68
LDLRP01130 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.54□□□□□ -1.68
LDLRP01130 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.54□□□□□ -1.68
LDLRP01130 TVP23CP2-201ENST00000571473 623 ntBASIC4.54□□□□□ -1.68
LDLRP01130 SNORA74C-1-201ENST00000580726 201 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC146944.4-201ENST00000602697 718 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC011453.2-201ENST00000603737 729 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AP002802.2-201ENST00000605877 235 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC096586.1-201ENST00000610267 561 ntBASIC4.54□□□□□ -1.68
LDLRP01130 uc_338.9-201ENST00000617424 182 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.54□□□□□ -1.68
LDLRP01130 AC022079.1-201ENST00000621546 602 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC019206.1-201ENST00000621938 425 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC019226.2-201ENST00000625973 424 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC055839.1-201ENST00000634467 498 ntBASIC4.54□□□□□ -1.68
LDLRP01130 AC093311.1-201ENST00000506586 2021 ntBASIC4.54□□□□□ -1.68
LDLRP01130 PHKBP1-201ENST00000450951 1951 ntBASIC4.54□□□□□ -1.68
LDLRP01130 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LDLRP01130 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDLRP01130 AC009313.2-201ENST00000417893 1941 ntBASIC4.54□□□□□ -1.68
LDLRP01130 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
LDLRP01130 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LDLRP01130 MFSD8-220ENST00000641243 1422 ntBASIC4.54□□□□□ -1.68
LDLRP01130 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
LDLRP01130 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LDLRP01130 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LDLRP01130 AC120338.1-201ENST00000625074 1541 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.53□□□□□ -1.68
LDLRP01130 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LDLRP01130 METTL21EP-201ENST00000298105 713 ntBASIC4.53□□□□□ -1.68
LDLRP01130 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LDLRP01130 RNU6-225P-201ENST00000384613 103 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AP000357.1-201ENST00000409926 1165 ntBASIC4.53□□□□□ -1.68
LDLRP01130 RPL6P29-201ENST00000414863 865 ntBASIC4.53□□□□□ -1.68
LDLRP01130 TCEA1P4-201ENST00000415066 844 ntBASIC4.53□□□□□ -1.68
LDLRP01130 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.53□□□□□ -1.68
LDLRP01130 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.53□□□□□ -1.68
LDLRP01130 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.53□□□□□ -1.68
LDLRP01130 AC004074.1-201ENST00000421810 1063 ntBASIC4.53□□□□□ -1.68
LDLRP01130 PDSS1P1-201ENST00000422953 1114 ntBASIC4.53□□□□□ -1.68
LDLRP01130 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.53□□□□□ -1.68
LDLRP01130 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms