Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC083843.3-201ENST00000623679 2186 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFBP01127 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFBP01127 THAP12P5-201ENST00000405864 2275 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFBP01127 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFBP01127 RNA5SP119-201ENST00000362715 117 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 HMGB1P10-201ENST00000395823 563 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 MTND2P11-201ENST00000423638 648 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 MTND4P24-201ENST00000424002 397 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 AL035458.1-201ENST00000433096 585 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFBP01127 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.47□□□□□ -1.69
PDGFBP01127 AC092447.2-201ENST00000435487 669 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 XKRY2-201ENST00000442362 1093 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFBP01127 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.47□□□□□ -1.69
PDGFBP01127 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.47□□□□□ -1.69
PDGFBP01127 RPL5P30-201ENST00000465511 891 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 GAPDHP36-201ENST00000480688 918 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 AC110768.1-201ENST00000509222 400 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFBP01127 AC016559.2-201ENST00000510759 359 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 RNA5SP519-201ENST00000516480 119 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.47□□□□□ -1.69
PDGFBP01127 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.47□□□□□ -1.69
PDGFBP01127 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFBP01127 MIR5685-201ENST00000579080 79 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 AC127024.5-201ENST00000580085 462 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 MIR3936-201ENST00000584304 110 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 AC107982.3-201ENST00000584957 985 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 ABI1P1-201ENST00000603375 1120 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 SNORA51-201ENST00000606420 132 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PDGFBP01127 U6.48-201ENST00000618523 106 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 MIR6891-201ENST00000618788 93 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.47□□□□□ -1.69
PDGFBP01127 AC073592.7-201ENST00000623659 507 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 AL356094.1-201ENST00000624663 1212 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PDGFBP01127 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFBP01127 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PDGFBP01127 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PDGFBP01127 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.47□□□□□ -1.69
PDGFBP01127 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PDGFBP01127 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PDGFBP01127 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PDGFBP01127 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.46□□□□□ -1.69
PDGFBP01127 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.46□□□□□ -1.69
PDGFBP01127 SAGE2P-201ENST00000420011 2126 ntBASIC4.46□□□□□ -1.69
PDGFBP01127 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PDGFBP01127 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PDGFBP01127 LINC01355-201ENST00000566551 5444 ntBASIC4.46□□□□□ -1.69
PDGFBP01127 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PDGFBP01127 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFBP01127 AC073136.1-201ENST00000449426 2884 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.46□□□□□ -1.7
PDGFBP01127 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFBP01127 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFBP01127 MTND4P21-201ENST00000453886 1357 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PDGFBP01127 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFBP01127 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFBP01127 AP000580.1-201ENST00000404439 358 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 HMGB1P13-201ENST00000406019 642 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 AP000357.1-201ENST00000409926 1165 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 RN7SKP177-201ENST00000410567 355 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 RAB9AP3-201ENST00000412737 573 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 TCEA1P4-201ENST00000415066 844 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFBP01127 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFBP01127 AL050321.1-201ENST00000432363 400 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 RAB9AP1-201ENST00000449393 573 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 TPT1P1-201ENST00000458495 518 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFBP01127 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.46□□□□□ -1.7
PDGFBP01127 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFBP01127 VTA1P2-201ENST00000520205 911 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 IFITM8P-201ENST00000522529 394 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFBP01127 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFBP01127 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.46□□□□□ -1.7
PDGFBP01127 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFBP01127 POLR2KP1-201ENST00000553226 168 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 AC087477.6-201ENST00000559595 843 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.46□□□□□ -1.7
PDGFBP01127 AGGF1P9-201ENST00000561884 913 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.46□□□□□ -1.7
PDGFBP01127 AC115085.1-201ENST00000588924 229 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFBP01127 AC096577.2-201ENST00000611455 153 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFBP01127 AC025016.1-201ENST00000616746 682 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PDGFBP01127 AL356490.1-201ENST00000623079 479 ntBASIC4.46□□□□□ -1.7
PDGFBP01127 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.46□□□□□ -1.7
PDGFBP01127 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFBP01127 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.46□□□□□ -1.7
PDGFBP01127 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDGFBP01127 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms