Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS4BO75351 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 SOCS5P3-201ENST00000425115 1576 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 RNU1-146P-201ENST00000364015 165 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 RNA5SP223-201ENST00000365174 120 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 SNORA56-201ENST00000383966 129 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 Y_RNA.408-201ENST00000383987 102 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 RNU6-317P-201ENST00000384031 107 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 AL031577.2-201ENST00000404133 280 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS4BO75351 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC104333.2-201ENST00000422630 192 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC244035.1-201ENST00000430042 390 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 SEPT7P5-201ENST00000434048 306 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 KCTD10P1-201ENST00000434203 625 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AL161722.2-201ENST00000434731 981 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AC093155.1-201ENST00000440164 826 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS4BO75351 RPS11P7-201ENST00000442125 465 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 TAF9P1-201ENST00000445421 515 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 YWHAQP9-201ENST00000445891 512 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AC012512.1-201ENST00000446594 718 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 GAPDHP25-201ENST00000447061 1001 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 AL035090.1-201ENST00000454835 332 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 TAF9P2-201ENST00000454958 515 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AL133244.1-201ENST00000456007 258 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 RPL7AP52-201ENST00000458096 790 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 RPL7P6-201ENST00000480903 738 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AC109462.1-201ENST00000491087 368 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS4BO75351 MTCO3P7-201ENST00000510008 774 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 OR51K1P-201ENST00000510214 950 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 MTND5P13-201ENST00000513046 1079 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 MTCO2P32-201ENST00000514865 403 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 RN7SKP31-201ENST00000516354 278 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 AL390838.2-201ENST00000602394 274 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS4BO75351 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS4BO75351 AP003973.1-201ENST00000604639 691 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AL162431.4-201ENST00000604674 411 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AC133644.2-201ENST00000608142 540 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AC092653.1-201ENST00000608509 531 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 uc_338.9-201ENST00000617424 182 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS4BO75351 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS4BO75351 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
VPS4BO75351 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VPS4BO75351 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VPS4BO75351 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 AC114947.2-201ENST00000565748 2125 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 RBPJP2-201ENST00000618187 1444 ntBASIC5.14□□□□□ -1.59
VPS4BO75351 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS4BO75351 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS4BO75351 HSPA8P18-201ENST00000439846 1928 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS4BO75351 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VPS4BO75351 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VPS4BO75351 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS4BO75351 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VPS4BO75351 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS4BO75351 RNA5SP183-201ENST00000362452 119 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS4BO75351 MIR589-201ENST00000385238 99 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 HSPA8P15-201ENST00000401676 786 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AL161449.1-201ENST00000414531 1199 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS4BO75351 SRSF1P1-201ENST00000424058 520 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 GSTM5P1-201ENST00000434751 660 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AC129850.1-201ENST00000436203 508 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 MTCO2P16-201ENST00000436962 677 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AL591503.2-201ENST00000442314 1005 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS4BO75351 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS4BO75351 HMGB1P4-201ENST00000455362 567 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS4BO75351 RPS29P22-201ENST00000472363 168 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms