Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.7□□□□□ -1.82
SGCEO43556 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.7□□□□□ -1.82
SGCEO43556 AC115285.1-201ENST00000424879 736 ntBASIC3.7□□□□□ -1.82
SGCEO43556 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.7□□□□□ -1.82
SGCEO43556 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 RPS26P40-201ENST00000435209 294 ntBASIC3.7□□□□□ -1.82
SGCEO43556 RPL23AP46-201ENST00000438548 490 ntBASIC3.7□□□□□ -1.82
SGCEO43556 RPL23AP89-201ENST00000439324 255 ntBASIC3.7□□□□□ -1.82
SGCEO43556 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 CEACAMP9-201ENST00000442990 513 ntBASIC3.7□□□□□ -1.82
SGCEO43556 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.7□□□□□ -1.82
SGCEO43556 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.7□□□□□ -1.82
SGCEO43556 AC011276.1-201ENST00000469688 323 ntBASIC3.7□□□□□ -1.82
SGCEO43556 PPIAP15-201ENST00000479662 484 ntBASIC3.7□□□□□ -1.82
SGCEO43556 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.7□□□□□ -1.82
SGCEO43556 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.7□□□□□ -1.82
SGCEO43556 RNA5SP49-201ENST00000516450 115 ntBASIC3.7□□□□□ -1.82
SGCEO43556 RNA5SP519-201ENST00000516480 119 ntBASIC3.7□□□□□ -1.82
SGCEO43556 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.7□□□□□ -1.82
SGCEO43556 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.7□□□□□ -1.82
SGCEO43556 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SGCEO43556 AC083899.3-201ENST00000603413 594 ntBASIC3.7□□□□□ -1.82
SGCEO43556 AC115621.1-201ENST00000604653 858 ntBASIC3.7□□□□□ -1.82
SGCEO43556 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 FAM27D1-201ENST00000612308 341 ntBASIC3.7□□□□□ -1.82
SGCEO43556 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.7□□□□□ -1.82
SGCEO43556 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.7□□□□□ -1.82
SGCEO43556 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 AC066616.2-201ENST00000559334 1481 ntBASIC3.7□□□□□ -1.82
SGCEO43556 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.7□□□□□ -1.82
SGCEO43556 ERCC6-202ENST00000374127 1782 ntBASIC3.7□□□□□ -1.82
SGCEO43556 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.7□□□□□ -1.82
SGCEO43556 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SGCEO43556 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SGCEO43556 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SGCEO43556 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SGCEO43556 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SGCEO43556 ZNF962P-201ENST00000443465 3140 ntBASIC3.69□□□□□ -1.82
SGCEO43556 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
SGCEO43556 AC123912.3-201ENST00000600907 1367 ntBASIC3.69□□□□□ -1.82
SGCEO43556 RNU1-87P-201ENST00000363727 170 ntBASIC3.69□□□□□ -1.82
SGCEO43556 RNA5SP509-201ENST00000364577 119 ntBASIC3.69□□□□□ -1.82
SGCEO43556 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.69□□□□□ -1.82
SGCEO43556 AL159169.1-201ENST00000421119 127 ntBASIC3.69□□□□□ -1.82
SGCEO43556 AL732292.1-201ENST00000426692 226 ntBASIC3.69□□□□□ -1.82
SGCEO43556 HMGB3P5-201ENST00000428894 612 ntBASIC3.69□□□□□ -1.82
SGCEO43556 MTCO1P45-201ENST00000431457 267 ntBASIC3.69□□□□□ -1.82
SGCEO43556 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.69□□□□□ -1.82
SGCEO43556 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SGCEO43556 ACTR3P2-201ENST00000439585 1257 ntBASIC3.69□□□□□ -1.82
SGCEO43556 CBX1P1-201ENST00000440184 427 ntBASIC3.69□□□□□ -1.82
SGCEO43556 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.69□□□□□ -1.82
SGCEO43556 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.69□□□□□ -1.82
SGCEO43556 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.69□□□□□ -1.82
SGCEO43556 RAD23BP3-201ENST00000454157 1152 ntBASIC3.69□□□□□ -1.82
SGCEO43556 ANP32BP2-201ENST00000454525 545 ntBASIC3.69□□□□□ -1.82
SGCEO43556 RN7SL303P-201ENST00000469773 251 ntBASIC3.69□□□□□ -1.82
SGCEO43556 RN7SL459P-201ENST00000481078 302 ntBASIC3.69□□□□□ -1.82
SGCEO43556 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.69□□□□□ -1.82
SGCEO43556 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.69□□□□□ -1.82
SGCEO43556 AC117525.1-201ENST00000515228 503 ntBASIC3.69□□□□□ -1.82
SGCEO43556 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.69□□□□□ -1.82
SGCEO43556 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SGCEO43556 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SGCEO43556 TRAV8-5-201ENST00000537369 341 ntBASIC3.69□□□□□ -1.82
SGCEO43556 AC063950.1-201ENST00000552036 308 ntBASIC3.69□□□□□ -1.82
SGCEO43556 TVP23BP1-201ENST00000557500 617 ntBASIC3.69□□□□□ -1.82
SGCEO43556 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.69□□□□□ -1.82
SGCEO43556 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.69□□□□□ -1.82
SGCEO43556 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.69□□□□□ -1.82
SGCEO43556 AC068790.4-201ENST00000602474 263 ntBASIC3.69□□□□□ -1.82
SGCEO43556 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.69□□□□□ -1.82
SGCEO43556 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SGCEO43556 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SGCEO43556 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.69□□□□□ -1.82
SGCEO43556 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SGCEO43556 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.69□□□□□ -1.82
SGCEO43556 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SGCEO43556 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SGCEO43556 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SGCEO43556 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SGCEO43556 SAGE2P-201ENST00000420011 2126 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SGCEO43556 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SGCEO43556 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.68□□□□□ -1.82
SGCEO43556 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SGCEO43556 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SGCEO43556 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SGCEO43556 OTUD4P1-201ENST00000237841 3067 ntBASIC3.68□□□□□ -1.82
SGCEO43556 RNU4-39P-201ENST00000362455 127 ntBASIC3.68□□□□□ -1.82
SGCEO43556 RNU6-618P-201ENST00000363518 112 ntBASIC3.68□□□□□ -1.82
SGCEO43556 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.68□□□□□ -1.82
SGCEO43556 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SGCEO43556 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.68□□□□□ -1.82
SGCEO43556 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCEO43556 AL365396.1-201ENST00000430854 671 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms