Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC010306.1-201ENST00000523223 1117 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 AP000916.1-201ENST00000533869 835 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.19□□□□□ -1.74
SLC28A1O00337 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC28A1O00337 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC28A1O00337 HMGB3P26-201ENST00000560051 582 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC28A1O00337 MIR4436B2-201ENST00000581415 91 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 MIR4436B1-201ENST00000583272 91 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC28A1O00337 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.19□□□□□ -1.74
SLC28A1O00337 AP001160.4-201ENST00000596971 382 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 MIR432-201ENST00000606207 94 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SLC28A1O00337 AC095038.2-201ENST00000621464 1070 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 BMS1P21-201ENST00000634565 365 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 AC132825.7-201ENST00000638744 335 ntBASIC4.19□□□□□ -1.74
SLC28A1O00337 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC28A1O00337 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC28A1O00337 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC28A1O00337 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC28A1O00337 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SLC28A1O00337 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC28A1O00337 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SLC28A1O00337 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
SLC28A1O00337 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC28A1O00337 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC28A1O00337 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC28A1O00337 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC28A1O00337 RNA5SP175-201ENST00000364275 119 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 GCNT6-201ENST00000379591 934 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
SLC28A1O00337 RNU2-65P-201ENST00000410162 185 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AL445183.3-201ENST00000414168 502 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC28A1O00337 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC28A1O00337 RPL7AP25-201ENST00000423357 805 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC28A1O00337 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC28A1O00337 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC28A1O00337 MOB1AP2-201ENST00000446060 614 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 RPL7P31-201ENST00000450192 724 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 RPL7P22-201ENST00000466005 733 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AC083982.1-201ENST00000485679 344 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC28A1O00337 RPS6P4-201ENST00000494693 758 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC28A1O00337 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC28A1O00337 OR51K1P-201ENST00000510214 950 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 VWA8P1-201ENST00000510889 176 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC28A1O00337 RNA5SP154-201ENST00000516193 111 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.18□□□□□ -1.74
SLC28A1O00337 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.18□□□□□ -1.74
SLC28A1O00337 C1DP5-201ENST00000525775 383 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AC113192.3-201ENST00000529152 742 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 OR5BC1P-201ENST00000529327 739 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 OR4R2P-201ENST00000530815 597 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
SLC28A1O00337 AC124068.1-201ENST00000563131 678 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 ATP5F1P7-201ENST00000567330 760 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 MIR4270-201ENST00000581799 70 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AC090312.2-201ENST00000582687 378 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SLC28A1O00337 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC28A1O00337 AC069304.3-201ENST00000603938 1084 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC28A1O00337 AL158211.2-201ENST00000607282 395 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AL021997.2-201ENST00000615674 271 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AC006213.5-201ENST00000619673 288 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC28A1O00337 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SLC28A1O00337 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC28A1O00337 MTCO1P4-201ENST00000520516 1409 ntBASIC4.18□□□□□ -1.74
SLC28A1O00337 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SLC28A1O00337 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SLC28A1O00337 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SLC28A1O00337 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC28A1O00337 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC28A1O00337 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC28A1O00337 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC28A1O00337 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC28A1O00337 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC28A1O00337 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SLC28A1O00337 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SLC28A1O00337 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SLC28A1O00337 RNU1-87P-201ENST00000363727 170 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SLC28A1O00337 RNU6-481P-201ENST00000384194 107 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SLC28A1O00337 MIR708-201ENST00000390708 88 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 RPL23AP59-201ENST00000399415 461 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.17□□□□□ -1.74
SLC28A1O00337 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.17□□□□□ -1.74
SLC28A1O00337 RPL12P3-201ENST00000440080 396 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AL121877.1-201ENST00000453704 622 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AC096992.1-201ENST00000459808 709 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 OR5H3P-201ENST00000502817 919 ntBASIC4.17□□□□□ -1.74
SLC28A1O00337 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms