Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AC009229.4-201ENST00000623854 1947 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 AL356473.1-201ENST00000406203 1408 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 SGO1P2-201ENST00000429458 1589 ntBASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.89□□□□□ -1.47
CTDP1Q9Y5B0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AP000756.2-201ENST00000624168 2567 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC006960.1-201ENST00000419980 153 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC099670.2-201ENST00000435130 321 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 HMGB1P48-201ENST00000446155 598 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 OR52J1P-201ENST00000450596 932 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC097262.1-201ENST00000452559 548 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC108161.1-201ENST00000461060 402 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC021205.1-201ENST00000468797 348 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC007686.1-201ENST00000488511 463 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC097173.1-201ENST00000505862 819 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 SEPT10P1-201ENST00000517342 1162 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 MTCO3P15-201ENST00000526563 574 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC021006.3-201ENST00000530771 192 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC105233.3-201ENST00000531125 744 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC007115.1-201ENST00000546853 234 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 CYP2C60P-201ENST00000566088 139 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AP005262.1-201ENST00000582646 997 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC004987.4-201ENST00000603383 338 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AL031281.1-201ENST00000604049 488 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC072039.2-201ENST00000608883 439 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC022306.2-201ENST00000617563 647 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AC109454.4-201ENST00000623411 649 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 LINC01109-201ENST00000603837 3081 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 AL390237.1-201ENST00000404226 1415 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 ECM1P2-201ENST00000503354 1577 ntBASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.88□□□□□ -1.47
CTDP1Q9Y5B0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 RNA5SP27-201ENST00000363839 119 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 RNU6-553P-201ENST00000364047 96 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 MIR142-201ENST00000384835 87 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC093719.1-202ENST00000392735 373 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 ATP5HP3-201ENST00000396994 486 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 RSL24D1P4-201ENST00000400938 484 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 Y_RNA.625-201ENST00000411256 107 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC006065.1-201ENST00000422539 802 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC019178.2-201ENST00000423595 505 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 RPL7AP49-201ENST00000429522 581 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AL591438.1-201ENST00000433508 581 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC008072.1-201ENST00000434254 824 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC129850.1-201ENST00000436203 508 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 OR7E125P-201ENST00000443450 846 ntBASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.87□□□□□ -1.47
CTDP1Q9Y5B0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms