Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC091167.1-201ENST00000492017 396 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 BTF3L4P4-201ENST00000506381 449 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC106806.2-201ENST00000509365 500 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 OR8X1P-201ENST00000534542 869 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC079171.1-201ENST00000568788 914 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC123786.2-201ENST00000603459 275 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC015802.5-201ENST00000607478 399 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC005021.1-201ENST00000608730 355 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC114781.5-201ENST00000615297 108 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AL445363.3-201ENST00000623080 671 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AP003497.2-201ENST00000624220 967 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC011944.2-201ENST00000624440 683 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 AC008013.2-202ENST00000637965 364 ntBASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
TRAPPC4Q9Y296 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 RPS4XP5-202ENST00000449995 1334 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 OR11H4-201ENST00000315409 1082 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 MTND3P20-201ENST00000407663 186 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 RN7SKP182-201ENST00000410772 298 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AL807761.1-201ENST00000417622 171 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AL606490.7-201ENST00000433136 191 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 RPS26P40-201ENST00000435209 294 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AL513343.1-201ENST00000451818 792 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 RPS29P19-201ENST00000479709 171 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AC091515.1-201ENST00000548110 679 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 MIMT1-201ENST00000597105 1050 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 MTCO2P22-201ENST00000603246 681 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AP004372.1-201ENST00000604842 844 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AL023583.1-201ENST00000607518 1143 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AC128687.2-201ENST00000609657 566 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AP000843.1-201ENST00000624880 701 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 MIR3653-201ENST00000625572 110 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 AC244205.2-202ENST00000635781 342 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 SPATA2P1-201ENST00000431223 2055 ntBASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRAPPC4Q9Y296 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AL583835.1-201ENST00000399570 407 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AL589655.1-201ENST00000405398 482 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AP000357.1-201ENST00000409926 1165 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 RPL23AP26-201ENST00000412728 464 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 RNF19BPX-201ENST00000426224 625 ntBASIC3.79□□□□□ -1.8
TRAPPC4Q9Y296 IFNNP1-201ENST00000429219 553 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms