Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MTCYBP10-201ENST00000424905 650 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AL669831.1-202ENST00000428504 417 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC005189.1-201ENST00000431286 310 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 GAPDHP48-201ENST00000436626 961 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 RPL7P54-201ENST00000438336 674 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 HMGB3P12-201ENST00000438745 556 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 MTCO3P45-201ENST00000443036 613 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 XKRYP5-201ENST00000449659 483 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC023141.9-201ENST00000458734 412 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 RPS7P6-201ENST00000485777 579 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 RPL34P33-201ENST00000486062 334 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC012170.1-201ENST00000495139 359 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC008802.1-201ENST00000519121 791 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AP002404.1-201ENST00000532005 451 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 OR6C73P-201ENST00000546432 358 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC051619.2-201ENST00000559063 397 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 FAM157A-202ENST00000615155 405 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 MIR6826-201ENST00000617808 98 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 Y_RNA.557-201ENST00000384680 107 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AL035660.1-201ENST00000422041 222 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 BEND7P1-201ENST00000422058 457 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AC002486.1-201ENST00000435098 391 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 OR3D1P-201ENST00000438288 955 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 H3F3BP1-201ENST00000440551 403 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 RPL5P25-201ENST00000441148 775 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 RNU6-420P-201ENST00000458780 107 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 MRPS17P3-201ENST00000465453 385 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 RPL35P6-201ENST00000490024 372 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AL136038.1-201ENST00000497246 351 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AC008638.1-201ENST00000506035 866 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 Y_RNA.667-201ENST00000516212 107 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AC105031.1-201ENST00000518550 476 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 RNU6-988P-201ENST00000519081 107 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AC109635.6-201ENST00000525487 1113 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AC027229.1-201ENST00000583887 253 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AC104237.2-201ENST00000612456 443 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AL512624.1-201ENST00000613638 469 ntBASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 ATM-228ENST00000639240 498 ntTSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
PDZRN3Q9UPQ7 TET1P1-201ENST00000426627 2301 ntBASIC7.87□□□□□ -1.15
PDZRN3Q9UPQ7 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
PDZRN3Q9UPQ7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
PDZRN3Q9UPQ7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
PDZRN3Q9UPQ7 AC015689.2-201ENST00000528172 1738 ntBASIC7.87□□□□□ -1.15
PDZRN3Q9UPQ7 RN7SKP121-201ENST00000410842 305 ntBASIC7.87□□□□□ -1.15
PDZRN3Q9UPQ7 NAP1L1P2-201ENST00000414182 1089 ntBASIC7.87□□□□□ -1.15
PDZRN3Q9UPQ7 AC007435.1-201ENST00000421086 415 ntBASIC7.87□□□□□ -1.15
PDZRN3Q9UPQ7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms