Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC120057.2-201ENST00000571520 271 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 AC008638.3-201ENST00000603341 463 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 AC004777.1-201ENST00000624317 287 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 IPO8P1-201ENST00000455509 3109 ntBASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
NPC1L1Q9UHC9 SNORA11.1-201ENST00000408133 129 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 HMGB3P5-201ENST00000428894 612 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 TMX2P1-201ENST00000436507 708 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 HMGN1P8-201ENST00000463578 288 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 RPL7L1P8-201ENST00000469911 741 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 RPS26P15-201ENST00000488067 348 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AL139395.1-201ENST00000603662 160 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AP000255.1-201ENST00000610276 676 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AL158062.1-201ENST00000619632 745 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AC039056.2-201ENST00000622261 511 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AC067931.1-201ENST00000624190 671 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 AP002001.2-201ENST00000529025 1469 ntBASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
NPC1L1Q9UHC9 RNA5SP387-201ENST00000364226 106 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 RNU6-761P-201ENST00000384148 107 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC007389.2-201ENST00000434630 306 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 RPS20P21-201ENST00000466859 343 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 RPS3AP6-201ENST00000484430 795 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC139783.2-201ENST00000504847 1145 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 DUX4L52-201ENST00000549363 777 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 MRPS35P3-201ENST00000603189 709 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AL451086.1-201ENST00000605596 223 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AL159169.2-201ENST00000610061 1269 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 MIR448-201ENST00000362131 111 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 RAB9AP5-201ENST00000437794 597 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 VN1R25P-201ENST00000443385 738 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 RAB9AP2-201ENST00000443911 597 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 NANOGP10-201ENST00000453325 895 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 VN1R40P-201ENST00000455196 941 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 OR9M1P-201ENST00000459641 921 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC084198.1-201ENST00000477747 402 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC147055.1-201ENST00000509261 750 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 EIF1AXP2-201ENST00000555940 413 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 NPM1P47-201ENST00000560843 856 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 SULT1C2P2-201ENST00000562517 294 ntBASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPC1L1Q9UHC9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AC016588.2-201ENST00000632484 3021 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 USP8P1-201ENST00000494673 3183 ntBASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.28□□□□□ -1.56
NPC1L1Q9UHC9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms