Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RWDD4P1-201ENST00000488019 565 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 HNRNPKP5-201ENST00000515300 253 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC090281.1-201ENST00000523019 276 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC105233.3-201ENST00000531125 744 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 BNIP3P5-201ENST00000562290 498 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC245128.3-201ENST00000594721 748 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 VN1R85P-201ENST00000601587 426 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 BMS1P7-201ENST00000602440 1052 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC017076.1-201ENST00000607613 578 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC024941.1-201ENST00000612250 334 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC016911.1-201ENST00000613297 452 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC067852.7-201ENST00000623270 535 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AC019278.1-201ENST00000623516 479 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 USP9YP4-201ENST00000424401 1745 ntBASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.94□□□□□ -1.62
CLIP2Q9UDT6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 MAPK10-253ENST00000641010 4072 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 RNA5SP502-201ENST00000362694 119 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 Y_RNA.126-201ENST00000363382 111 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 RNA5SP130-201ENST00000364431 114 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 AL450992.3-201ENST00000413192 568 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 RPL17P36-201ENST00000420302 549 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 AL356806.1-201ENST00000422524 916 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 MRPL50P1-201ENST00000431951 384 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 HSFY6P-201ENST00000445573 403 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 IFNWP4-201ENST00000453148 294 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 AC104629.2-201ENST00000468627 598 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 RPL23AP2-201ENST00000471227 466 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 HMGB3P14-201ENST00000494195 599 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 AC104164.2-201ENST00000496953 495 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 IGHV3-63-201ENST00000518422 341 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 PHBP17-201ENST00000528576 541 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 AC084373.1-201ENST00000603311 235 ntBASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.93□□□□□ -1.62
CLIP2Q9UDT6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 RNA5SP513-201ENST00000364648 118 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 RNA5SP283-201ENST00000365604 119 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AL034374.1-201ENST00000406329 351 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 OR8G2P-201ENST00000412796 908 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AL512504.1-201ENST00000415494 778 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AL161631.1-201ENST00000417933 486 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 BX119904.1-201ENST00000432026 348 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AC092013.1-201ENST00000438795 332 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 ELOCP8-201ENST00000439309 332 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 ELOCP15-201ENST00000442090 332 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AL451050.1-201ENST00000450126 415 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 UBTFL9-201ENST00000534504 1148 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 OR8R1P-201ENST00000543943 764 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AC116447.1-201ENST00000613153 453 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AC026368.1-201ENST00000614934 690 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AP006248.2-201ENST00000623309 592 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 AC010608.2-201ENST00000624830 470 ntBASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLIP2Q9UDT6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms