Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AL049870.4-201ENST00000555741 486 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC022655.2-201ENST00000577280 318 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC090948.2-201ENST00000607363 564 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AL096803.3-201ENST00000609032 532 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC024941.1-201ENST00000612250 334 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AL354696.1-201ENST00000614652 497 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 SNX18P1Y-201ENST00000616231 511 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 MIR7151-201ENST00000617477 60 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC009237.17-201ENST00000618111 748 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC112484.5-201ENST00000624189 228 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC055839.1-201ENST00000634467 498 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC009501.3-201ENST00000605001 1352 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC009313.2-201ENST00000417893 1941 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 AC107027.3-201ENST00000565095 3473 ntBASIC3.74□□□□□ -1.81
CLCF1Q9UBD9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC015813.6-201ENST00000624409 5808 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 RNA5SP130-201ENST00000364431 114 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 RNU11-4P-201ENST00000391149 133 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 PPIAP31-201ENST00000405422 495 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 NCSTNP1-201ENST00000406229 144 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AL161631.1-201ENST00000417933 486 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC004448.2-201ENST00000422360 586 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 DPY19L1P2-201ENST00000426647 915 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 VDAC1P6-201ENST00000430062 855 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AL356276.2-201ENST00000435919 558 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 BTBD7P2-201ENST00000441962 620 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 RPS15AP29-201ENST00000445539 400 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 RPL5P32-201ENST00000454085 879 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 RNU7-27P-201ENST00000459281 62 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 DEFB109F-201ENST00000491870 277 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 RN7SL604P-201ENST00000492589 296 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC108145.1-201ENST00000503770 153 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 PHBP17-201ENST00000528576 541 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 OR8R1P-201ENST00000543943 764 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 SNRPGP1-201ENST00000553864 222 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 SLC25A36P1-201ENST00000590111 465 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 RNU4-89P-201ENST00000607443 133 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AL391834.1-201ENST00000609609 560 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC067931.1-201ENST00000624190 671 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 AC010329.2-201ENST00000595195 2737 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 KPNA2P2-201ENST00000419546 1489 ntBASIC3.73□□□□□ -1.81
CLCF1Q9UBD9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 MIR372-201ENST00000362225 67 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 SNORD115-48-201ENST00000364764 76 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 RNU6-244P-201ENST00000391028 104 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms