Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CHD7Q9P2D1 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AL034403.1-201ENST00000399414 885 ntBASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AL136131.1-201ENST00000406079 803 ntBASIC3.81□□□□□ -1.8
CHD7Q9P2D1 RPL7AP73-201ENST00000413490 353 ntBASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 TAF9BP1-201ENST00000396646 746 ntBASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AC093698.1-201ENST00000423843 571 ntBASIC3.81□□□□□ -1.8
CHD7Q9P2D1 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 U3.44-201ENST00000458938 192 ntBASIC3.81□□□□□ -1.8
CHD7Q9P2D1 RPL5P12-201ENST00000477071 851 ntBASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AC004924.1-201ENST00000480160 781 ntBASIC3.81□□□□□ -1.8
CHD7Q9P2D1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AC113192.3-201ENST00000529152 742 ntBASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AC007066.2-202ENST00000566531 914 ntBASIC3.81□□□□□ -1.8
CHD7Q9P2D1 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.81□□□□□ -1.8
CHD7Q9P2D1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 GNG5P1-201ENST00000255500 204 ntBASIC3.8□□□□□ -1.8
CHD7Q9P2D1 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 NANOGNBP1-201ENST00000448444 480 ntBASIC3.8□□□□□ -1.8
CHD7Q9P2D1 AL591473.1-201ENST00000464297 313 ntBASIC3.8□□□□□ -1.8
CHD7Q9P2D1 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.8□□□□□ -1.8
CHD7Q9P2D1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 RNU6-729P-201ENST00000384399 107 ntBASIC3.8□□□□□ -1.8
CHD7Q9P2D1 GSTA8P-201ENST00000404253 637 ntBASIC3.8□□□□□ -1.8
CHD7Q9P2D1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD7Q9P2D1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 MIR133A2-201ENST00000347538 102 ntBASIC3.79□□□□□ -1.8
CHD7Q9P2D1 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.79□□□□□ -1.8
CHD7Q9P2D1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 AC026422.1-201ENST00000623961 452 ntBASIC3.79□□□□□ -1.8
CHD7Q9P2D1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 AL365361.1-201ENST00000566942 3481 ntBASIC3.79□□□□□ -1.8
CHD7Q9P2D1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 MIR195-201ENST00000385194 87 ntBASIC3.79□□□□□ -1.8
CHD7Q9P2D1 AL359643.1-201ENST00000404109 423 ntBASIC3.79□□□□□ -1.8
CHD7Q9P2D1 VTI1BP4-201ENST00000427516 527 ntBASIC3.79□□□□□ -1.8
CHD7Q9P2D1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 MIR8069-1-201ENST00000616627 86 ntBASIC3.79□□□□□ -1.8
CHD7Q9P2D1 AL713922.2-201ENST00000619384 716 ntBASIC3.79□□□□□ -1.8
CHD7Q9P2D1 MIR8069-2-201ENST00000621412 86 ntBASIC3.79□□□□□ -1.8
CHD7Q9P2D1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CHD7Q9P2D1 RPF2P1-201ENST00000424137 906 ntBASIC3.78□□□□□ -1.8
CHD7Q9P2D1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 AC100770.1-201ENST00000532310 322 ntBASIC3.78□□□□□ -1.8
CHD7Q9P2D1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 CKS1BP3-201ENST00000600888 237 ntBASIC3.78□□□□□ -1.8
CHD7Q9P2D1 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHD7Q9P2D1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms