Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC063949.1-201ENST00000552900 865 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC025627.2-201ENST00000576220 160 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC005191.1-201ENST00000603950 358 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC110741.2-201ENST00000605278 268 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AL021707.7-201ENST00000607991 416 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC119674.1-212ENST00000641155 993 ntBASIC3.8□□□□□ -1.8
VAPAQ9P0L0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.8□□□□□ -1.8
VAPAQ9P0L0 AC027287.1-201ENST00000553115 1453 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AL627171.1-201ENST00000618845 1308 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 SPATA2P1-201ENST00000431223 2055 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 RNU6-398P-201ENST00000384143 109 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 RPL31P52-201ENST00000407532 367 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 MIR1251-201ENST00000408552 70 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 RN7SKP56-201ENST00000410513 331 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 ELOCP19-201ENST00000411919 318 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 BTF3P10-201ENST00000433415 495 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 PPIAP17-201ENST00000438507 471 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 RPS4XP4-201ENST00000443195 763 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 OR5AN2P-201ENST00000534535 896 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AC100827.5-201ENST00000615883 426 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AL591424.2-201ENST00000617023 128 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AC124312.6-202ENST00000623624 418 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 RPL23AP61-201ENST00000623642 466 ntBASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
VAPAQ9P0L0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 SNORA62.2-201ENST00000364672 152 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 RNU4-25P-201ENST00000410569 230 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC011933.1-201ENST00000413334 321 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 TRGV6-201ENST00000417928 299 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 RPL7P53-201ENST00000421245 739 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 IFNNP1-201ENST00000429219 553 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AL500522.2-201ENST00000448562 343 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 RNU7-27P-201ENST00000459281 62 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC116533.1-201ENST00000459748 321 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC013356.1-201ENST00000489027 564 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AL049874.4-201ENST00000557593 255 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms