Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 AC068020.1-201ENST00000594215 661 ntBASIC4.84□□□□□ -1.63
SALL1Q9NSC2 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.84□□□□□ -1.63
SALL1Q9NSC2 AC008638.3-201ENST00000603341 463 ntBASIC4.84□□□□□ -1.63
SALL1Q9NSC2 BNIP3P11-201ENST00000603878 563 ntBASIC4.84□□□□□ -1.63
SALL1Q9NSC2 AC022387.2-201ENST00000604050 448 ntBASIC4.84□□□□□ -1.63
SALL1Q9NSC2 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.84□□□□□ -1.63
SALL1Q9NSC2 AC006133.1-201ENST00000617106 264 ntBASIC4.84□□□□□ -1.63
SALL1Q9NSC2 AL356863.1-201ENST00000623378 1080 ntBASIC4.84□□□□□ -1.63
SALL1Q9NSC2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SALL1Q9NSC2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.84□□□□□ -1.63
SALL1Q9NSC2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SALL1Q9NSC2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SALL1Q9NSC2 CYP1D1P-201ENST00000416662 1433 ntBASIC4.84□□□□□ -1.63
SALL1Q9NSC2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.84□□□□□ -1.63
SALL1Q9NSC2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SALL1Q9NSC2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AL589826.1-201ENST00000340697 249 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 MTND3P4-201ENST00000453537 303 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 RNU1-45P-201ENST00000517191 141 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AC023632.4-201ENST00000517783 191 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AC079171.1-201ENST00000568788 914 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 MIR4444-1-201ENST00000581696 74 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 MIR4444-2-201ENST00000584390 74 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AC107982.3-201ENST00000584957 985 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 SNX6P1-201ENST00000601728 1224 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AC067838.1-201ENST00000606064 577 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AC012603.1-201ENST00000606424 528 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 FAM91A3P-201ENST00000456826 2544 ntBASIC4.83□□□□□ -1.64
SALL1Q9NSC2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.83□□□□□ -1.64
SALL1Q9NSC2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 RNU6-1331P-201ENST00000363658 106 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 SNORD35B-201ENST00000363660 87 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 RNA5SP399-201ENST00000364003 117 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 SNORD74.4-201ENST00000364129 80 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 RNU6-1263P-201ENST00000384601 106 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 RNA5SP171-201ENST00000391071 115 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AL445584.1-201ENST00000431451 330 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AL353748.1-201ENST00000440753 474 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 PTMAP3-201ENST00000447474 330 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 OR9M1P-201ENST00000459641 921 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC010469.1-201ENST00000463864 576 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC025445.1-201ENST00000502728 300 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 MTND2P31-201ENST00000512602 616 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 RPS27AP18-201ENST00000515536 459 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AL139395.1-201ENST00000603662 160 ntBASIC4.82□□□□□ -1.64
SALL1Q9NSC2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.82□□□□□ -1.64
SALL1Q9NSC2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL1Q9NSC2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SALL1Q9NSC2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SALL1Q9NSC2 SCN1A-220ENST00000641603 12506 ntBASIC4.81□□□□□ -1.64
SALL1Q9NSC2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL1Q9NSC2 MARK2P15-201ENST00000432204 2186 ntBASIC4.81□□□□□ -1.64
SALL1Q9NSC2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.81□□□□□ -1.64
SALL1Q9NSC2 RNU6-525P-201ENST00000363685 104 ntBASIC4.81□□□□□ -1.64
SALL1Q9NSC2 RNU6-670P-201ENST00000364312 104 ntBASIC4.81□□□□□ -1.64
SALL1Q9NSC2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SALL1Q9NSC2 RNU6ATAC-201ENST00000408749 126 ntBASIC4.81□□□□□ -1.64
SALL1Q9NSC2 RNA5SP306-201ENST00000411087 107 ntBASIC4.81□□□□□ -1.64
SALL1Q9NSC2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms