Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RN7SKP92-201ENST00000517266 244 ntBASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 OR4U1P-201ENST00000554958 912 ntBASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 AC073429.2-201ENST00000569694 1444 ntBASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 AC067852.4-201ENST00000590314 478 ntBASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 AP003117.1-201ENST00000602771 554 ntBASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 AC090525.3-201ENST00000605601 189 ntBASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 AC064801.1-201ENST00000612025 407 ntBASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 AC015726.3-201ENST00000624501 418 ntBASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 AC119674.1-220ENST00000641502 1048 ntBASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.91□□□□□ -1.78
CCNB1IP1Q9NPC3 OR56B2P-202ENST00000641377 2453 ntBASIC3.9□□□□□ -1.78
CCNB1IP1Q9NPC3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CCNB1IP1Q9NPC3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.9□□□□□ -1.78
CCNB1IP1Q9NPC3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CCNB1IP1Q9NPC3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CCNB1IP1Q9NPC3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.9□□□□□ -1.78
CCNB1IP1Q9NPC3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CCNB1IP1Q9NPC3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCNB1IP1Q9NPC3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 U3.15-201ENST00000365398 212 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 MIR659-201ENST00000384963 97 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 MIR1179-201ENST00000408703 91 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AMD1P2-201ENST00000412936 992 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 SNRPFP1-201ENST00000414761 252 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 RPL7AP25-201ENST00000423357 805 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AL031663.1-201ENST00000437445 219 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC092691.2-201ENST00000461787 803 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 RPS23P1-201ENST00000491662 432 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC104164.2-201ENST00000496953 495 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 BNIP3P41-201ENST00000503774 571 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC093720.1-201ENST00000505681 714 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 NARSP2-201ENST00000518524 679 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 IGHV3-32-201ENST00000519182 355 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 MIR548Y-201ENST00000582739 110 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC011477.5-201ENST00000586571 259 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 NF1P5-201ENST00000588287 448 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 MIMT1-201ENST00000597105 1050 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC115621.1-201ENST00000604653 858 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AL645927.2-201ENST00000618350 349 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 CR392039.4-201ENST00000624968 501 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 AC012618.3-205ENST00000637896 1496 ntBASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCNB1IP1Q9NPC3 Z82217.1-201ENST00000625157 8149 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AP001486.2-201ENST00000561652 5113 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 RNU1-87P-201ENST00000363727 170 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 RNU6-317P-201ENST00000384031 107 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 MIR192-201ENST00000384915 110 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 RPS4XP9-201ENST00000405151 780 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AL512504.1-201ENST00000415494 778 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AC087650.1-201ENST00000431445 468 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 MED6P1-201ENST00000439659 713 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AL138878.2-201ENST00000440581 1241 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 TPMTP4-201ENST00000450749 678 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 NDUFA12P1-201ENST00000455914 406 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 SNRPGP5-201ENST00000456003 220 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 RPL21P126-201ENST00000470049 478 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AC007686.1-201ENST00000488511 463 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AK3P4-201ENST00000504283 583 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AC111000.3-201ENST00000508057 576 ntBASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCNB1IP1Q9NPC3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms