Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 AC093331.1-201ENST00000521474 169 ntBASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 KCTD9P6-201ENST00000522306 950 ntBASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 TRAV15-201ENST00000556680 249 ntBASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 RPL12P25-202ENST00000598100 674 ntBASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 AC023813.4-201ENST00000607580 580 ntBASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 SNORA11.6-201ENST00000619030 128 ntBASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 AC020978.9-201ENST00000624380 1141 ntBASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 AC011944.2-201ENST00000624440 683 ntBASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 RLIMP2-201ENST00000427891 1563 ntBASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMIM11BQ8TCY0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 SAGE2P-201ENST00000420011 2126 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RAD1P1-201ENST00000231383 813 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RNA5SP42-201ENST00000364278 115 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 SNORA73.2-201ENST00000364946 201 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RNU6-805P-201ENST00000365643 106 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RNU6-178P-201ENST00000384631 104 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RNA5SP424-201ENST00000390988 115 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AL161909.1-201ENST00000397390 712 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 EI24P2-201ENST00000397776 1076 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 TPT1P2-201ENST00000413105 503 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RPL7P53-201ENST00000421245 739 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 FAR1P1-201ENST00000427163 934 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RPS27P29-201ENST00000463110 252 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RPS23P7-201ENST00000466210 444 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RPL23AP44-201ENST00000482216 473 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RN7SL101P-201ENST00000496350 279 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 snoU109.6-201ENST00000516831 118 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AC090819.1-201ENST00000523800 1111 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 DEFB109D-201ENST00000529497 240 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AP000676.2-201ENST00000529711 301 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 BRD9P1-201ENST00000529855 560 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AC006518.1-201ENST00000541449 943 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 YPEL5P3-201ENST00000547227 352 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 MIR4646-201ENST00000580775 63 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 MIR4270-201ENST00000581799 70 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AC008507.1-201ENST00000587506 734 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AL445222.1-201ENST00000607259 628 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AC090948.2-201ENST00000607363 564 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AC079684.1-201ENST00000621405 437 ntBASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SMIM11BQ8TCY0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 AC068647.1-201ENST00000489539 2265 ntBASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 MIR621-201ENST00000384919 96 ntBASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 MIR129-1-201ENST00000384972 72 ntBASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 AC104297.1-201ENST00000393779 870 ntBASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 AC136624.1-201ENST00000400791 413 ntBASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 AL109941.1-201ENST00000401925 229 ntBASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 RNA5SP31-201ENST00000411144 127 ntBASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 AC011933.1-201ENST00000413334 321 ntBASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 AC017079.2-201ENST00000416102 485 ntBASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 AC108032.1-201ENST00000416706 207 ntBASIC2.37□□□□□ -2.03
SMIM11BQ8TCY0 GLRXP1-201ENST00000423261 334 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms