Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 AP005119.1-201ENST00000580956 292 ntBASIC5.53□□□□□ -1.52
NUP43Q8NFH3 MIR544B-201ENST00000582372 78 ntBASIC5.53□□□□□ -1.52
NUP43Q8NFH3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 AC018695.5-201ENST00000605872 315 ntBASIC5.53□□□□□ -1.52
NUP43Q8NFH3 AL136295.6-201ENST00000610486 658 ntBASIC5.53□□□□□ -1.52
NUP43Q8NFH3 AC005618.4-201ENST00000625053 554 ntBASIC5.53□□□□□ -1.52
NUP43Q8NFH3 PISRT1-201ENST00000626175 531 ntBASIC5.53□□□□□ -1.52
NUP43Q8NFH3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 AC110994.2-201ENST00000635481 492 ntBASIC5.53□□□□□ -1.52
NUP43Q8NFH3 AP000550.3-201ENST00000637734 379 ntBASIC5.53□□□□□ -1.52
NUP43Q8NFH3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP43Q8NFH3 AP002512.4-202ENST00000641599 4530 ntBASIC5.53□□□□□ -1.52
NUP43Q8NFH3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC093225.1-201ENST00000506867 1408 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 SELENOWP1-201ENST00000322792 252 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 SNRPEP3-201ENST00000338402 276 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 U8.3-201ENST00000363321 132 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 PEX12P1-201ENST00000400284 1048 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 RPS4XP5-201ENST00000419038 768 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 SDCBPP3-201ENST00000419629 891 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AL590399.2-201ENST00000427536 309 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 PNKDP1-201ENST00000435914 430 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC005077.1-201ENST00000449226 375 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 snoU13.29-201ENST00000459370 104 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 MEMO1P3-201ENST00000459811 302 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 MTND5P5-201ENST00000503764 376 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC117522.3-201ENST00000507974 584 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AP003467.2-201ENST00000520175 319 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC078899.1-201ENST00000521432 1185 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC008126.1-201ENST00000549019 480 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AL845552.1-201ENST00000556820 323 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC090751.1-201ENST00000566966 267 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 TXNP4-201ENST00000575018 310 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 MIR4433B-201ENST00000581329 102 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC006115.2-201ENST00000596823 202 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AL133338.2-201ENST00000604292 736 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC092266.1-201ENST00000610958 165 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 AC019278.1-201ENST00000623516 479 ntBASIC5.52□□□□□ -1.53
NUP43Q8NFH3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
NUP43Q8NFH3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms