Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AC139713.2-214ENST00000642059 1811 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 AL451142.2-201ENST00000429076 2090 ntBASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC50Q8IVM0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC012618.3-205ENST00000637896 1496 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 MIR7-1-201ENST00000384871 110 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 RNU6-244P-201ENST00000391028 104 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 CNOT7P1-201ENST00000429006 852 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 RPS29P17-201ENST00000430795 166 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 RPS26P40-201ENST00000435209 294 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC009263.1-201ENST00000441193 1239 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 Z95152.1-201ENST00000453556 656 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 RPS29P33-201ENST00000456717 146 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 RPL36AP13-201ENST00000457490 317 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 RPS20P4-201ENST00000461659 355 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC109327.1-201ENST00000471666 403 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 PPIAP15-201ENST00000479662 484 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 RN7SL459P-201ENST00000481078 302 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC007686.1-201ENST00000488511 463 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 FABP5P6-201ENST00000510588 409 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 RNU6-491P-201ENST00000516099 110 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 DEFB109D-201ENST00000529497 240 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC105233.3-201ENST00000531125 744 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 RPL23AP87-202ENST00000573039 466 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC022655.2-201ENST00000577280 318 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 FAM27D1-201ENST00000612308 341 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AC090246.1-201ENST00000616499 426 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 AP000346.3-201ENST00000622821 210 ntBASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC50Q8IVM0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 MARK2P15-201ENST00000432204 2186 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 RNU6-532P-201ENST00000384318 107 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 SNORA37-201ENST00000384504 129 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 MIR585-201ENST00000384887 94 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 MIR192-201ENST00000384915 110 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AMZ2P2-201ENST00000406819 1057 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC011933.1-201ENST00000413334 321 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 NDUFA5P10-201ENST00000432147 357 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 IFNWP4-201ENST00000453148 294 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 CLIC4P1-201ENST00000453177 535 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 snoU13.1-201ENST00000459157 104 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC116533.1-201ENST00000459748 321 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC021205.1-201ENST00000468797 348 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC092045.1-201ENST00000495716 1231 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC010342.1-201ENST00000514047 877 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 IGKV2-38-201ENST00000517443 247 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC128687.2-201ENST00000609657 566 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AP005264.7-201ENST00000625003 745 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 MIR6715B-201ENST00000637172 77 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC119674.1-220ENST00000641502 1048 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 OR5AC4P-202ENST00000642086 985 ntBASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC50Q8IVM0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC50Q8IVM0 CASC19-284ENST00000642142 1868 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms