Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 SNORA21-201ENST00000362423 132 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 Y_RNA.159-201ENST00000363674 87 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 RNU6-777P-201ENST00000364265 104 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AL451142.1-201ENST00000375867 775 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 RNU6-225P-201ENST00000384613 103 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 PDCL2P1-201ENST00000419302 352 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AL353193.1-201ENST00000421444 268 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AC023141.3-201ENST00000436698 278 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 OR3D1P-201ENST00000438288 955 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 RPS23P9-201ENST00000448848 438 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 RNU7-136P-201ENST00000458819 69 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AC005165.2-201ENST00000466070 380 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 SLC25A51P1-201ENST00000468432 871 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AL035690.1-201ENST00000490892 383 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AC018797.1-201ENST00000510791 255 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 RNU6-488P-201ENST00000515918 99 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 Vault.3-201ENST00000516676 95 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AC022690.1-201ENST00000526681 550 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AL121821.2-201ENST00000556081 394 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 SUB1P2-201ENST00000556401 297 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AC244100.4-201ENST00000617747 388 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 AL162377.2-201ENST00000624532 337 ntBASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.82□□□□□ -1.48
UBE3DQ7Z6J8 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 MTCO1P11-201ENST00000429111 1528 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 RPL23AP32-201ENST00000395315 459 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 MRPL42P2-201ENST00000403169 426 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 RN7SKP32-201ENST00000410167 303 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 OR9R1P-201ENST00000412200 877 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AL096829.1-201ENST00000413677 457 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 RPS15AP30-201ENST00000420976 390 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 OR10T1P-201ENST00000424327 947 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 MTCO2P12-201ENST00000427426 682 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 CBX1P4-201ENST00000439415 457 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC004980.3-201ENST00000447046 365 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC073909.1-201ENST00000447112 999 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 OR5M2P-201ENST00000529003 936 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC243972.3-201ENST00000539655 198 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC125612.1-201ENST00000547580 377 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 MIR3671-201ENST00000580455 88 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC017100.2-201ENST00000584628 355 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC007687.1-201ENST00000602704 304 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC009027.1-201ENST00000604510 479 ntBASIC5.81□□□□□ -1.48
UBE3DQ7Z6J8 AC008966.2-201ENST00000606157 453 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms