Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL713922.2-201ENST00000619384 716 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC3□□□□□ -1.93
VPS13CQ709C8 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 AL365361.1-201ENST00000566942 3481 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 OR10J6P-201ENST00000289731 930 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 MIR449A-201ENST00000362113 91 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AL358178.1-201ENST00000407698 397 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AL158071.1-201ENST00000430315 461 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 RPL21P11-201ENST00000461458 483 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC103843.2-201ENST00000530523 682 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AL121603.1-201ENST00000553815 142 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC005476.1-201ENST00000554427 397 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 SMCR2_2.1-201ENST00000619783 161 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 U4.6-201ENST00000621618 127 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 Y_RNA.238-201ENST00000364441 102 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 RPS29P4-201ENST00000414733 161 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC093698.1-201ENST00000423843 571 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC008065.1-201ENST00000428525 348 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AL831737.1-201ENST00000441288 271 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC004448.2-201ENST00000422360 586 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 Y_RNA.638-201ENST00000459374 113 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 RPL32P34-201ENST00000486380 400 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 IGKV2-26-201ENST00000518305 343 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC100770.1-201ENST00000532310 322 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS13CQ709C8 AC006539.2-201ENST00000601729 572 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.99□□□□□ -1.93
VPS13CQ709C8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
VPS13CQ709C8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 FRG1CP-201ENST00000358464 769 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 UBA52P6-201ENST00000399822 382 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 BX119904.3-201ENST00000428194 957 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 AL671855.1-201ENST00000446875 1203 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC093663.1-201ENST00000497190 394 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 MIR4472-2-201ENST00000582069 67 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 AL117339.4-201ENST00000608335 7063 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 AL645937.1-201ENST00000641739 1652 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC007685.1-201ENST00000329806 452 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 MTHFD2P2-201ENST00000407725 247 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 DBIP2-201ENST00000419076 262 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 UBA52P3-201ENST00000491303 382 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 AL356274.2-201ENST00000624379 3752 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC003985.2-201ENST00000562268 1669 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC007336.1-201ENST00000576365 3828 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC020656.2-201ENST00000613291 5309 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 Z99755.1-201ENST00000414048 380 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC025554.1-201ENST00000505641 188 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS13CQ709C8 SLC25A36P1-201ENST00000590111 465 ntBASIC2.98□□□□□ -1.93
VPS13CQ709C8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms