Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC034244.2-201ENST00000514668 858 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.83□□□□□ -1.8
RFX4Q33E94 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.83□□□□□ -1.8
RFX4Q33E94 AC087888.1-201ENST00000550884 1254 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.83□□□□□ -1.8
RFX4Q33E94 AC012414.2-201ENST00000559474 187 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 AC079171.1-201ENST00000568788 914 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 EIF1P6-201ENST00000600054 334 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 MTCO2P22-201ENST00000603246 681 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 AC113403.1-201ENST00000604910 193 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.83□□□□□ -1.8
RFX4Q33E94 AC100814.1-201ENST00000606963 623 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.83□□□□□ -1.8
RFX4Q33E94 OR6R2P-201ENST00000609216 300 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RFX4Q33E94 LINC00216-201ENST00000623548 1126 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 RPL23AP61-201ENST00000623642 466 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.83□□□□□ -1.8
RFX4Q33E94 AC008013.2-202ENST00000637965 364 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.83□□□□□ -1.8
RFX4Q33E94 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFX4Q33E94 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RFX4Q33E94 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFX4Q33E94 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RFX4Q33E94 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFX4Q33E94 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFX4Q33E94 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RFX4Q33E94 ERCC6-202ENST00000374127 1782 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.82□□□□□ -1.8
RFX4Q33E94 AC079741.1-201ENST00000321498 212 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.82□□□□□ -1.8
RFX4Q33E94 RPL23AP59-201ENST00000399415 461 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 FAR2P2-201ENST00000413041 594 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 RPA2P2-201ENST00000419698 796 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 OR6K4P-201ENST00000423179 955 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 RPEP3-201ENST00000425462 676 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 AL157831.1-201ENST00000426134 473 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 RNF19BPX-201ENST00000426224 625 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 AL445528.1-201ENST00000426330 420 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 MTCYBP29-201ENST00000436327 1006 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.82□□□□□ -1.8
RFX4Q33E94 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.82□□□□□ -1.8
RFX4Q33E94 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.82□□□□□ -1.8
RFX4Q33E94 AC114878.1-201ENST00000441166 358 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 MTND2P3-201ENST00000452458 470 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.82□□□□□ -1.8
RFX4Q33E94 OR52A4P-201ENST00000472867 958 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.82□□□□□ -1.8
RFX4Q33E94 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.82□□□□□ -1.8
RFX4Q33E94 AC108471.1-201ENST00000513977 287 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 IGHV3-32-201ENST00000519182 355 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 OR4V1P-201ENST00000525394 1140 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.82□□□□□ -1.8
RFX4Q33E94 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.82□□□□□ -1.8
RFX4Q33E94 AC110743.1-201ENST00000584870 478 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.82□□□□□ -1.8
RFX4Q33E94 PSMA6P4-201ENST00000603247 718 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.82□□□□□ -1.8
RFX4Q33E94 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.82□□□□□ -1.8
RFX4Q33E94 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RFX4Q33E94 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RFX4Q33E94 MIR6730-201ENST00000622213 67 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.82□□□□□ -1.8
RFX4Q33E94 AC140479.6-201ENST00000633535 357 ntBASIC3.82□□□□□ -1.8
RFX4Q33E94 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RFX4Q33E94 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.82□□□□□ -1.8
RFX4Q33E94 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RFX4Q33E94 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFX4Q33E94 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.81□□□□□ -1.8
RFX4Q33E94 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFX4Q33E94 RNU1-18P-201ENST00000363062 164 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 RN7SKP44-201ENST00000363602 316 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RFX4Q33E94 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RFX4Q33E94 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RFX4Q33E94 AL034374.1-201ENST00000406329 351 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 RPS16P5-201ENST00000406501 404 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFX4Q33E94 RBMY2KP-201ENST00000418221 992 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AC073464.3-201ENST00000422564 712 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AC011998.1-201ENST00000433403 117 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 RSL24D1P8-201ENST00000434442 492 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 RPL23AP52-201ENST00000439311 478 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AC092809.1-201ENST00000441469 474 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.81□□□□□ -1.8
RFX4Q33E94 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.81□□□□□ -1.8
RFX4Q33E94 FABP3P2-201ENST00000453169 399 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 RPL5P13-201ENST00000462840 709 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 S100A11P1-201ENST00000477525 312 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 MTND6P6-201ENST00000478031 263 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AC106872.2-201ENST00000494303 480 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AC231760.1-201ENST00000498002 260 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFX4Q33E94 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RFX4Q33E94 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFX4Q33E94 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 AC007424.1-203ENST00000554613 687 ntBASIC3.81□□□□□ -1.8
RFX4Q33E94 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.81□□□□□ -1.8
RFX4Q33E94 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.81□□□□□ -1.8
RFX4Q33E94 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms