Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL161713.1-201ENST00000555538 145 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 PSMA6P4-201ENST00000603247 718 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AL451044.1-201ENST00000604867 238 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AL139254.3-201ENST00000641097 674 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 EIF2AP4-201ENST00000424793 1781 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC110792.3-201ENST00000595906 1614 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AL158163.1-201ENST00000603915 1649 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC017002.4-201ENST00000604721 1525 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 RNU1-14P-201ENST00000362759 152 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 RNVU1-6-201ENST00000364688 164 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AL035696.2-201ENST00000407941 709 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 RN7SKP235-201ENST00000410662 305 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 RPS12P23-201ENST00000419579 400 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AL157831.1-201ENST00000426134 473 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 CNOT7P1-201ENST00000429006 852 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 IFNNP1-201ENST00000429219 553 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 ARF4P2-201ENST00000430209 526 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC087650.1-201ENST00000431445 468 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 RPL23AP62-201ENST00000463396 453 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 RPL35P6-201ENST00000490024 372 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC012170.1-201ENST00000495139 359 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC010627.1-201ENST00000503819 1294 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 Vault.1-201ENST00000516474 102 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC010476.1-201ENST00000519111 851 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 PDCL2P2-201ENST00000533651 189 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 MIR4715-201ENST00000584117 79 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC007687.1-201ENST00000602704 304 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC104662.1-201ENST00000604448 511 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC115621.1-201ENST00000604653 858 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC010857.1-201ENST00000606398 594 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC019193.2-201ENST00000610012 634 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 MIR6730-201ENST00000622213 67 ntBASIC3.13□□□□□ -1.91
HIST1H1AQ02539 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HIST1H1AQ02539 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 AC138393.1-206ENST00000540997 1886 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 RNU1-18P-201ENST00000363062 164 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 RNA5SP447-201ENST00000363749 119 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 MIR192-201ENST00000384915 110 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 PTMAP5-201ENST00000393073 333 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 CYB5AP4-201ENST00000396692 399 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 AC136624.1-201ENST00000400791 413 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 NRBF2P2-201ENST00000413087 861 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 AC011933.1-201ENST00000413334 321 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 AL138878.2-201ENST00000440581 1241 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.12□□□□□ -1.91
HIST1H1AQ02539 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 RPL36AP13-201ENST00000457490 317 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 snoU13.1-201ENST00000459157 104 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 AC116533.1-201ENST00000459748 321 ntBASIC3.12□□□□□ -1.91
HIST1H1AQ02539 RN7SL93P-201ENST00000463035 293 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms