Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL133412.1-201ENST00000380194 2992 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 LARP1BP1-201ENST00000506036 1359 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS1Q01581 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS1Q01581 RPL23AP48-201ENST00000406913 488 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 RWDD4P2-201ENST00000426392 563 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 PPIAP21-201ENST00000464473 501 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 RPL7P1-201ENST00000468161 747 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 RPL7P9-201ENST00000468715 747 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 AC010618.1-201ENST00000469924 477 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 RWDD4P1-201ENST00000488019 565 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 RN7SKP122-201ENST00000515923 296 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 RNU6-347P-201ENST00000516658 105 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 AC138701.1-201ENST00000524329 714 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 ARF4P1-201ENST00000605447 541 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 AC017076.1-201ENST00000607613 578 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 MIR6716-201ENST00000613413 80 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 AL445567.2-201ENST00000618935 498 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 AC074276.2-201ENST00000619891 348 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 AC067931.1-201ENST00000624190 671 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS1Q01581 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS1Q01581 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS1Q01581 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS1Q01581 AC018555.1-201ENST00000567548 1980 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGCS1Q01581 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS1Q01581 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS1Q01581 MTND4P26-201ENST00000415971 1359 ntBASIC3.89□□□□□ -1.79
HMGCS1Q01581 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGCS1Q01581 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 RNU6-819P-201ENST00000364116 107 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC068538.1-201ENST00000376856 336 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 RNU6-1279P-201ENST00000383917 103 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 RNU11-4P-201ENST00000391149 133 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AL590806.1-201ENST00000415818 853 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 RPL23AP38-201ENST00000423801 469 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC234779.1-201ENST00000425910 285 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 MTCO1P45-201ENST00000431457 267 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGCS1Q01581 NUTF2P3-201ENST00000448540 384 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 CCRL1P1-201ENST00000449542 1053 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 RN7SL604P-201ENST00000492589 296 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 VWA8P1-201ENST00000510889 176 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC108471.1-201ENST00000513977 287 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC117525.1-201ENST00000515228 503 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC104997.1-201ENST00000519761 717 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AP003730.1-201ENST00000524605 285 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 CYCSP29-201ENST00000533731 318 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC022968.1-201ENST00000567372 442 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC069366.1-201ENST00000583159 838 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC011477.5-201ENST00000586571 259 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC022387.2-201ENST00000604050 448 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGCS1Q01581 RMST_5.1-201ENST00000618704 126 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 MIR6810-201ENST00000622701 70 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC145207.9-201ENST00000623802 325 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGCS1Q01581 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGCS1Q01581 LINC02471-203ENST00000641941 4752 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 AC005261.4-201ENST00000600047 1385 ntBASIC3.88□□□□□ -1.79
HMGCS1Q01581 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGCS1Q01581 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.87□□□□□ -1.79
HMGCS1Q01581 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGCS1Q01581 AC009951.1-201ENST00000623674 2614 ntBASIC3.87□□□□□ -1.79
HMGCS1Q01581 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms