Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.38□□□□□ -1.71
TPM4P67936 AC005191.1-201ENST00000603950 358 ntBASIC4.38□□□□□ -1.71
TPM4P67936 AC211433.2-201ENST00000608433 387 ntBASIC4.38□□□□□ -1.71
TPM4P67936 AL592494.3-201ENST00000609485 464 ntBASIC4.38□□□□□ -1.71
TPM4P67936 AL391261.4-201ENST00000616012 481 ntBASIC4.38□□□□□ -1.71
TPM4P67936 AC009318.3-201ENST00000616916 503 ntBASIC4.38□□□□□ -1.71
TPM4P67936 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.38□□□□□ -1.71
TPM4P67936 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.38□□□□□ -1.71
TPM4P67936 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TPM4P67936 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.37□□□□□ -1.71
TPM4P67936 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TPM4P67936 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TPM4P67936 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TPM4P67936 RN7SKP103-201ENST00000363848 320 ntBASIC4.37□□□□□ -1.71
TPM4P67936 RNU1-132P-201ENST00000364300 164 ntBASIC4.37□□□□□ -1.71
TPM4P67936 RNU6-304P-201ENST00000364855 107 ntBASIC4.37□□□□□ -1.71
TPM4P67936 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TPM4P67936 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.37□□□□□ -1.71
TPM4P67936 AC119751.6-201ENST00000416712 186 ntBASIC4.37□□□□□ -1.71
TPM4P67936 AC127526.1-201ENST00000417526 366 ntBASIC4.37□□□□□ -1.71
TPM4P67936 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.37□□□□□ -1.71
TPM4P67936 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM4P67936 AC083863.1-201ENST00000438811 231 ntBASIC4.37□□□□□ -1.71
TPM4P67936 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.37□□□□□ -1.71
TPM4P67936 ACTR3P2-201ENST00000439585 1257 ntBASIC4.37□□□□□ -1.71
TPM4P67936 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.37□□□□□ -1.71
TPM4P67936 RANP8-201ENST00000444720 713 ntBASIC4.37□□□□□ -1.71
TPM4P67936 RPS17P13-201ENST00000448974 407 ntBASIC4.37□□□□□ -1.71
TPM4P67936 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.37□□□□□ -1.71
TPM4P67936 NANOGP10-201ENST00000453325 895 ntBASIC4.37□□□□□ -1.71
TPM4P67936 RNU6-1218P-201ENST00000458990 108 ntBASIC4.37□□□□□ -1.71
TPM4P67936 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM4P67936 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TPM4P67936 RN7SL177P-201ENST00000476596 299 ntBASIC4.37□□□□□ -1.71
TPM4P67936 USP9YP5-201ENST00000511770 630 ntBASIC4.37□□□□□ -1.71
TPM4P67936 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.37□□□□□ -1.71
TPM4P67936 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM4P67936 RN7SKP209-201ENST00000516888 304 ntBASIC4.37□□□□□ -1.71
TPM4P67936 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.37□□□□□ -1.71
TPM4P67936 AC091516.1-201ENST00000549191 703 ntBASIC4.37□□□□□ -1.71
TPM4P67936 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.37□□□□□ -1.71
TPM4P67936 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
TPM4P67936 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM4P67936 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TPM4P67936 AC010680.3-201ENST00000604215 520 ntBASIC4.37□□□□□ -1.71
TPM4P67936 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.37□□□□□ -1.71
TPM4P67936 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM4P67936 AL132640.2-201ENST00000559968 1698 ntBASIC4.37□□□□□ -1.71
TPM4P67936 MFSD8-216ENST00000641147 4009 ntBASIC4.37□□□□□ -1.71
TPM4P67936 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.37□□□□□ -1.71
TPM4P67936 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TPM4P67936 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
TPM4P67936 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
TPM4P67936 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TPM4P67936 CR381670.1-201ENST00000624291 1693 ntBASIC4.36□□□□□ -1.71
TPM4P67936 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TPM4P67936 RNU6-697P-201ENST00000363348 107 ntBASIC4.36□□□□□ -1.71
TPM4P67936 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TPM4P67936 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.36□□□□□ -1.71
TPM4P67936 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.36□□□□□ -1.71
TPM4P67936 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.36□□□□□ -1.71
TPM4P67936 AL590806.1-201ENST00000415818 853 ntBASIC4.36□□□□□ -1.71
TPM4P67936 AC108032.1-201ENST00000416706 207 ntBASIC4.36□□□□□ -1.71
TPM4P67936 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.36□□□□□ -1.71
TPM4P67936 AL645939.1-201ENST00000453429 797 ntBASIC4.36□□□□□ -1.71
TPM4P67936 EIF2S2P4-201ENST00000461070 984 ntBASIC4.36□□□□□ -1.71
TPM4P67936 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM4P67936 AC092045.1-201ENST00000495716 1231 ntBASIC4.36□□□□□ -1.71
TPM4P67936 AC010627.1-201ENST00000503819 1294 ntBASIC4.36□□□□□ -1.71
TPM4P67936 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM4P67936 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM4P67936 SUMO2P20-201ENST00000520803 283 ntBASIC4.36□□□□□ -1.71
TPM4P67936 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM4P67936 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM4P67936 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.36□□□□□ -1.71
TPM4P67936 OR4A12P-201ENST00000530847 918 ntBASIC4.36□□□□□ -1.71
TPM4P67936 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM4P67936 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.36□□□□□ -1.71
TPM4P67936 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM4P67936 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.36□□□□□ -1.71
TPM4P67936 BMS1P7-201ENST00000602440 1052 ntBASIC4.36□□□□□ -1.71
TPM4P67936 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM4P67936 AL049539.1-201ENST00000611964 459 ntBASIC4.36□□□□□ -1.71
TPM4P67936 MIR7151-201ENST00000617477 60 ntBASIC4.36□□□□□ -1.71
TPM4P67936 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TPM4P67936 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.36□□□□□ -1.71
TPM4P67936 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TPM4P67936 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.36□□□□□ -1.71
TPM4P67936 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TPM4P67936 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TPM4P67936 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TPM4P67936 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TPM4P67936 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM4P67936 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TPM4P67936 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms