Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 RNU4-89P-201ENST00000607443 133 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AC090246.1-201ENST00000616499 426 ntBASIC3.94□□□□□ -1.78
VSX2P58304 MIR7702-201ENST00000621931 59 ntBASIC3.94□□□□□ -1.78
VSX2P58304 AC138907.10-201ENST00000623708 983 ntBASIC3.94□□□□□ -1.78
VSX2P58304 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.94□□□□□ -1.78
VSX2P58304 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VSX2P58304 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.93□□□□□ -1.78
VSX2P58304 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.93□□□□□ -1.78
VSX2P58304 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VSX2P58304 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VSX2P58304 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VSX2P58304 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.93□□□□□ -1.78
VSX2P58304 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VSX2P58304 Y_RNA.126-201ENST00000363382 111 ntBASIC3.93□□□□□ -1.78
VSX2P58304 RNA5SP515-201ENST00000364570 118 ntBASIC3.93□□□□□ -1.78
VSX2P58304 AL034403.1-201ENST00000399414 885 ntBASIC3.93□□□□□ -1.78
VSX2P58304 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.93□□□□□ -1.78
VSX2P58304 RPL23AP4-201ENST00000427757 463 ntBASIC3.93□□□□□ -1.78
VSX2P58304 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VSX2P58304 MTCO1P45-201ENST00000431457 267 ntBASIC3.93□□□□□ -1.78
VSX2P58304 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.93□□□□□ -1.78
VSX2P58304 HMGN1P8-201ENST00000463578 288 ntBASIC3.93□□□□□ -1.78
VSX2P58304 RPL7P1-201ENST00000468161 747 ntBASIC3.93□□□□□ -1.78
VSX2P58304 RPL7P9-201ENST00000468715 747 ntBASIC3.93□□□□□ -1.78
VSX2P58304 RPL23AP2-201ENST00000471227 466 ntBASIC3.93□□□□□ -1.78
VSX2P58304 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VSX2P58304 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VSX2P58304 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.93□□□□□ -1.78
VSX2P58304 AC006499.6-201ENST00000511169 607 ntBASIC3.93□□□□□ -1.78
VSX2P58304 AC018797.3-201ENST00000513388 1241 ntBASIC3.93□□□□□ -1.78
VSX2P58304 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.93□□□□□ -1.78
VSX2P58304 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.93□□□□□ -1.78
VSX2P58304 CYP4A43P-201ENST00000568156 121 ntBASIC3.93□□□□□ -1.78
VSX2P58304 AGGF1P6-201ENST00000569213 976 ntBASIC3.93□□□□□ -1.78
VSX2P58304 RPL23AP87-202ENST00000573039 466 ntBASIC3.93□□□□□ -1.78
VSX2P58304 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.93□□□□□ -1.78
VSX2P58304 AC067959.1-201ENST00000604334 379 ntBASIC3.93□□□□□ -1.78
VSX2P58304 AC026368.1-201ENST00000614934 690 ntBASIC3.93□□□□□ -1.78
VSX2P58304 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.93□□□□□ -1.78
VSX2P58304 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.93□□□□□ -1.78
VSX2P58304 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.93□□□□□ -1.78
VSX2P58304 AP006248.2-201ENST00000623309 592 ntBASIC3.93□□□□□ -1.78
VSX2P58304 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.93□□□□□ -1.78
VSX2P58304 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VSX2P58304 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
VSX2P58304 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.93□□□□□ -1.78
VSX2P58304 RLIMP1-201ENST00000339626 1680 ntBASIC3.93□□□□□ -1.78
VSX2P58304 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.93□□□□□ -1.78
VSX2P58304 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
VSX2P58304 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VSX2P58304 PNPT1P2-201ENST00000456768 2050 ntBASIC3.93□□□□□ -1.78
VSX2P58304 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VSX2P58304 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VSX2P58304 MAPK10-253ENST00000641010 4072 ntBASIC3.92□□□□□ -1.78
VSX2P58304 AC087565.3-202ENST00000642085 1603 ntBASIC3.92□□□□□ -1.78
VSX2P58304 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VSX2P58304 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VSX2P58304 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
VSX2P58304 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VSX2P58304 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VSX2P58304 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VSX2P58304 MIR372-201ENST00000362225 67 ntBASIC3.92□□□□□ -1.78
VSX2P58304 SNORA57.1-201ENST00000391227 145 ntBASIC3.92□□□□□ -1.78
VSX2P58304 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VSX2P58304 RPL21P65-201ENST00000406094 466 ntBASIC3.92□□□□□ -1.78
VSX2P58304 HSPE1P12-201ENST00000412576 301 ntBASIC3.92□□□□□ -1.78
VSX2P58304 OR8G2P-201ENST00000412796 908 ntBASIC3.92□□□□□ -1.78
VSX2P58304 MTND4LP13-201ENST00000425022 298 ntBASIC3.92□□□□□ -1.78
VSX2P58304 SEC63P1-201ENST00000425785 1258 ntBASIC3.92□□□□□ -1.78
VSX2P58304 OR5BE1P-201ENST00000425977 939 ntBASIC3.92□□□□□ -1.78
VSX2P58304 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX2P58304 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.92□□□□□ -1.78
VSX2P58304 ELOCP18-201ENST00000434209 337 ntBASIC3.92□□□□□ -1.78
VSX2P58304 MTND2P2-201ENST00000434633 945 ntBASIC3.92□□□□□ -1.78
VSX2P58304 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.92□□□□□ -1.78
VSX2P58304 AL356276.2-201ENST00000435919 558 ntBASIC3.92□□□□□ -1.78
VSX2P58304 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX2P58304 RPS4XP4-201ENST00000443195 763 ntBASIC3.92□□□□□ -1.78
VSX2P58304 AC006326.1-201ENST00000445465 787 ntBASIC3.92□□□□□ -1.78
VSX2P58304 AL157884.3-201ENST00000448273 1184 ntBASIC3.92□□□□□ -1.78
VSX2P58304 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.92□□□□□ -1.78
VSX2P58304 CALM1P2-201ENST00000452941 448 ntBASIC3.92□□□□□ -1.78
VSX2P58304 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX2P58304 RPL36AP13-201ENST00000457490 317 ntBASIC3.92□□□□□ -1.78
VSX2P58304 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.92□□□□□ -1.78
VSX2P58304 RPL29P14-201ENST00000495837 428 ntBASIC3.92□□□□□ -1.78
VSX2P58304 KRT19P6-201ENST00000510983 209 ntBASIC3.92□□□□□ -1.78
VSX2P58304 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX2P58304 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX2P58304 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX2P58304 AC135001.1-201ENST00000544546 283 ntBASIC3.92□□□□□ -1.78
VSX2P58304 AL049874.4-201ENST00000557593 255 ntBASIC3.92□□□□□ -1.78
VSX2P58304 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.92□□□□□ -1.78
VSX2P58304 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.92□□□□□ -1.78
VSX2P58304 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VSX2P58304 AL451044.1-201ENST00000604867 238 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms