Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC106871.1-201ENST00000568324 3102 ntBASIC4.66□□□□□ -1.66
VCPP55072 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VCPP55072 CPHL1P-201ENST00000461341 3407 ntBASIC4.66□□□□□ -1.66
VCPP55072 RNU1-130P-201ENST00000363930 160 ntBASIC4.66□□□□□ -1.66
VCPP55072 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
VCPP55072 MIR708-201ENST00000390708 88 ntBASIC4.66□□□□□ -1.66
VCPP55072 SDHCP2-201ENST00000398565 501 ntBASIC4.66□□□□□ -1.66
VCPP55072 RPS27AP11-201ENST00000402798 447 ntBASIC4.66□□□□□ -1.66
VCPP55072 RNU6ATAC-201ENST00000408749 126 ntBASIC4.66□□□□□ -1.66
VCPP55072 AC093578.1-201ENST00000415219 368 ntBASIC4.66□□□□□ -1.66
VCPP55072 HMGB3P5-201ENST00000428894 612 ntBASIC4.66□□□□□ -1.66
VCPP55072 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.66□□□□□ -1.66
VCPP55072 MTCO1P45-201ENST00000431457 267 ntBASIC4.66□□□□□ -1.66
VCPP55072 TRIM60P13-201ENST00000432350 1283 ntBASIC4.66□□□□□ -1.66
VCPP55072 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.66□□□□□ -1.66
VCPP55072 RPL21P89-201ENST00000444021 467 ntBASIC4.66□□□□□ -1.66
VCPP55072 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.66□□□□□ -1.66
VCPP55072 HMGB3P13-201ENST00000511263 607 ntBASIC4.66□□□□□ -1.66
VCPP55072 AC108064.1-201ENST00000513791 460 ntBASIC4.66□□□□□ -1.66
VCPP55072 AC008694.2-201ENST00000517591 306 ntBASIC4.66□□□□□ -1.66
VCPP55072 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.66□□□□□ -1.66
VCPP55072 AP000827.1-201ENST00000527814 258 ntBASIC4.66□□□□□ -1.66
VCPP55072 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.66□□□□□ -1.66
VCPP55072 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.66□□□□□ -1.66
VCPP55072 MTCO2P22-201ENST00000603246 681 ntBASIC4.66□□□□□ -1.66
VCPP55072 AL160281.1-201ENST00000605307 311 ntBASIC4.66□□□□□ -1.66
VCPP55072 MIR6867-201ENST00000610636 67 ntBASIC4.66□□□□□ -1.66
VCPP55072 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.66□□□□□ -1.66
VCPP55072 AC112484.5-201ENST00000624189 228 ntBASIC4.66□□□□□ -1.66
VCPP55072 AL356121.2-201ENST00000624715 780 ntBASIC4.66□□□□□ -1.66
VCPP55072 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.66□□□□□ -1.66
VCPP55072 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.66□□□□□ -1.66
VCPP55072 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.66□□□□□ -1.66
VCPP55072 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.66□□□□□ -1.66
VCPP55072 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
VCPP55072 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VCPP55072 AC032011.1-201ENST00000611703 1549 ntBASIC4.66□□□□□ -1.66
VCPP55072 AC105074.1-201ENST00000623380 3095 ntBASIC4.66□□□□□ -1.66
VCPP55072 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VCPP55072 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
VCPP55072 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
VCPP55072 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.65□□□□□ -1.66
VCPP55072 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
VCPP55072 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VCPP55072 MFSD8-242ENST00000641690 4199 ntBASIC4.65□□□□□ -1.66
VCPP55072 AC068254.2-201ENST00000623938 3577 ntBASIC4.65□□□□□ -1.66
VCPP55072 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
VCPP55072 RNA5SP513-201ENST00000364648 118 ntBASIC4.65□□□□□ -1.67
VCPP55072 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VCPP55072 RNU6-152P-201ENST00000384037 107 ntBASIC4.65□□□□□ -1.67
VCPP55072 MIR92A2-201ENST00000385299 75 ntBASIC4.65□□□□□ -1.67
VCPP55072 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VCPP55072 AL078604.1-201ENST00000404609 466 ntBASIC4.65□□□□□ -1.67
VCPP55072 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.65□□□□□ -1.67
VCPP55072 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.65□□□□□ -1.67
VCPP55072 AL512504.1-201ENST00000415494 778 ntBASIC4.65□□□□□ -1.67
VCPP55072 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.65□□□□□ -1.67
VCPP55072 UBTFL3-201ENST00000418934 1024 ntBASIC4.65□□□□□ -1.67
VCPP55072 AL356806.1-201ENST00000422524 916 ntBASIC4.65□□□□□ -1.67
VCPP55072 SKP1P3-201ENST00000429280 487 ntBASIC4.65□□□□□ -1.67
VCPP55072 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.65□□□□□ -1.67
VCPP55072 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.65□□□□□ -1.67
VCPP55072 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.65□□□□□ -1.67
VCPP55072 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.65□□□□□ -1.67
VCPP55072 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.65□□□□□ -1.67
VCPP55072 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.65□□□□□ -1.67
VCPP55072 UBTFL6-201ENST00000477929 1024 ntBASIC4.65□□□□□ -1.67
VCPP55072 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.65□□□□□ -1.67
VCPP55072 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.65□□□□□ -1.67
VCPP55072 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VCPP55072 NPM1P41-201ENST00000512920 831 ntBASIC4.65□□□□□ -1.67
VCPP55072 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.65□□□□□ -1.67
VCPP55072 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.65□□□□□ -1.67
VCPP55072 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.65□□□□□ -1.67
VCPP55072 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.65□□□□□ -1.67
VCPP55072 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.65□□□□□ -1.67
VCPP55072 RN7SL703P-201ENST00000578485 302 ntBASIC4.65□□□□□ -1.67
VCPP55072 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VCPP55072 AC012467.1-201ENST00000607740 256 ntBASIC4.65□□□□□ -1.67
VCPP55072 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.65□□□□□ -1.67
VCPP55072 AL158196.1-201ENST00000616786 434 ntBASIC4.65□□□□□ -1.67
VCPP55072 MIR7154-201ENST00000620673 73 ntBASIC4.65□□□□□ -1.67
VCPP55072 AC067852.7-201ENST00000623270 535 ntBASIC4.65□□□□□ -1.67
VCPP55072 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VCPP55072 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VCPP55072 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
VCPP55072 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VCPP55072 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VCPP55072 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VCPP55072 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.64□□□□□ -1.67
VCPP55072 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.64□□□□□ -1.67
VCPP55072 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VCPP55072 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.64□□□□□ -1.67
VCPP55072 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VCPP55072 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.64□□□□□ -1.67
VCPP55072 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
VCPP55072 MIR449B-201ENST00000384995 97 ntBASIC4.64□□□□□ -1.67
VCPP55072 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.64□□□□□ -1.67
VCPP55072 AL356095.1-201ENST00000417217 199 ntBASIC4.64□□□□□ -1.67
VCPP55072 AC073464.3-201ENST00000422564 712 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms