Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AP005119.2-201ENST00000579735 1105 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 MIR548Y-201ENST00000582739 110 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.79□□□□□ -1.64
RAD23BP54727 RPL12P25-202ENST00000598100 674 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.79□□□□□ -1.64
RAD23BP54727 AC103792.1-201ENST00000603591 919 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.79□□□□□ -1.64
RAD23BP54727 AP002360.3-201ENST00000607673 710 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.79□□□□□ -1.64
RAD23BP54727 AC020634.1-201ENST00000608701 549 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 AC093673.2-201ENST00000609674 331 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 RN7SL722P-201ENST00000617780 284 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 RN7SL565P-201ENST00000618246 284 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 MIR6891-201ENST00000618788 93 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RAD23BP54727 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.79□□□□□ -1.64
RAD23BP54727 LINC01808-202ENST00000641680 1116 ntBASIC4.79□□□□□ -1.64
RAD23BP54727 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAD23BP54727 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAD23BP54727 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAD23BP54727 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RAD23BP54727 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.79□□□□□ -1.64
RAD23BP54727 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RAD23BP54727 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.79□□□□□ -1.64
RAD23BP54727 NXPH1-205ENST00000602349 1953 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
RAD23BP54727 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAD23BP54727 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.78□□□□□ -1.64
RAD23BP54727 KPNA2P2-201ENST00000419546 1489 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 RNU1-63P-201ENST00000383902 164 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 VTA1P1-201ENST00000414044 866 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.78□□□□□ -1.64
RAD23BP54727 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.78□□□□□ -1.64
RAD23BP54727 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 HSFY3P-201ENST00000444242 1191 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.78□□□□□ -1.64
RAD23BP54727 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.78□□□□□ -1.64
RAD23BP54727 NDUFA12P1-201ENST00000455914 406 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 RNU7-27P-201ENST00000459281 62 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 RN7SL738P-201ENST00000470264 297 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 AC096741.1-201ENST00000472250 846 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.78□□□□□ -1.64
RAD23BP54727 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.78□□□□□ -1.64
RAD23BP54727 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.78□□□□□ -1.64
RAD23BP54727 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.78□□□□□ -1.64
RAD23BP54727 AC093752.1-206ENST00000511823 336 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.78□□□□□ -1.64
RAD23BP54727 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.78□□□□□ -1.64
RAD23BP54727 AC008083.2-201ENST00000546707 476 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.78□□□□□ -1.64
RAD23BP54727 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.78□□□□□ -1.64
RAD23BP54727 AP001160.4-201ENST00000596971 382 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 AC093765.1-201ENST00000603758 881 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 AC013244.3-201ENST00000605614 388 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.78□□□□□ -1.64
RAD23BP54727 AC087683.2-201ENST00000611384 326 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAD23BP54727 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.78□□□□□ -1.64
RAD23BP54727 AC091905.2-201ENST00000623143 306 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.78□□□□□ -1.64
RAD23BP54727 AC139713.2-210ENST00000641741 992 ntBASIC4.78□□□□□ -1.64
RAD23BP54727 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
RAD23BP54727 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RAD23BP54727 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.78□□□□□ -1.64
RAD23BP54727 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAD23BP54727 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAD23BP54727 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
RAD23BP54727 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAD23BP54727 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAD23BP54727 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.77□□□□□ -1.65
RAD23BP54727 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAD23BP54727 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAD23BP54727 RNU1-130P-201ENST00000363930 160 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 RNU4-31P-201ENST00000384211 141 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 RNU6-185P-201ENST00000384421 107 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.77□□□□□ -1.65
RAD23BP54727 VN1R51P-201ENST00000411675 945 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 AC013404.1-201ENST00000413068 249 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.77□□□□□ -1.65
RAD23BP54727 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.77□□□□□ -1.65
RAD23BP54727 OSTCP5-201ENST00000425293 453 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 CENPIP1-201ENST00000425713 902 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
RAD23BP54727 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.77□□□□□ -1.65
RAD23BP54727 MTATP6P17-201ENST00000431030 672 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 FTH1P16-201ENST00000435241 552 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.77□□□□□ -1.65
RAD23BP54727 AL353093.1-201ENST00000441292 436 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 CEACAMP9-201ENST00000442990 513 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 AC092685.1-201ENST00000447960 1243 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 AL035407.2-201ENST00000454090 378 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 RPL21P126-201ENST00000470049 478 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 RN7SL41P-201ENST00000476144 297 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.77□□□□□ -1.65
RAD23BP54727 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RAD23BP54727 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.77□□□□□ -1.65
RAD23BP54727 OR10V3P-201ENST00000525712 725 ntBASIC4.77□□□□□ -1.65
RAD23BP54727 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.77□□□□□ -1.65
RAD23BP54727 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
RAD23BP54727 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms