Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.73□□□□□ -1.65
GPC3P51654 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.73□□□□□ -1.65
GPC3P51654 AC084824.1-201ENST00000550917 1005 ntBASIC4.73□□□□□ -1.65
GPC3P51654 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.73□□□□□ -1.65
GPC3P51654 AL352979.3-201ENST00000553515 247 ntBASIC4.73□□□□□ -1.65
GPC3P51654 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.73□□□□□ -1.65
GPC3P51654 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.73□□□□□ -1.65
GPC3P51654 NF1P5-201ENST00000588287 448 ntBASIC4.73□□□□□ -1.65
GPC3P51654 AC006116.5-201ENST00000591936 559 ntBASIC4.73□□□□□ -1.65
GPC3P51654 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.73□□□□□ -1.65
GPC3P51654 AC110792.4-201ENST00000609843 298 ntBASIC4.73□□□□□ -1.65
GPC3P51654 AL138721.1-201ENST00000616756 179 ntBASIC4.73□□□□□ -1.65
GPC3P51654 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.73□□□□□ -1.65
GPC3P51654 RNA5SP196-201ENST00000625967 102 ntBASIC4.73□□□□□ -1.65
GPC3P51654 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.73□□□□□ -1.65
GPC3P51654 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.73□□□□□ -1.65
GPC3P51654 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
GPC3P51654 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GPC3P51654 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
GPC3P51654 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.73□□□□□ -1.65
GPC3P51654 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
GPC3P51654 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GPC3P51654 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
GPC3P51654 Y_RNA.126-201ENST00000363382 111 ntBASIC4.72□□□□□ -1.65
GPC3P51654 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GPC3P51654 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.72□□□□□ -1.65
GPC3P51654 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.72□□□□□ -1.65
GPC3P51654 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.72□□□□□ -1.65
GPC3P51654 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.72□□□□□ -1.65
GPC3P51654 RPL7P31-201ENST00000450192 724 ntBASIC4.72□□□□□ -1.65
GPC3P51654 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.72□□□□□ -1.65
GPC3P51654 RPS7P7-201ENST00000463499 571 ntBASIC4.72□□□□□ -1.65
GPC3P51654 RPL7P22-201ENST00000466005 733 ntBASIC4.72□□□□□ -1.65
GPC3P51654 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.72□□□□□ -1.65
GPC3P51654 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.72□□□□□ -1.65
GPC3P51654 KCTD9P2-201ENST00000512203 1013 ntBASIC4.72□□□□□ -1.65
GPC3P51654 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.72□□□□□ -1.65
GPC3P51654 RNA5SP73-201ENST00000516744 108 ntBASIC4.72□□□□□ -1.65
GPC3P51654 MIR2116-201ENST00000517221 80 ntBASIC4.72□□□□□ -1.65
GPC3P51654 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.72□□□□□ -1.65
GPC3P51654 AC008694.2-201ENST00000517591 306 ntBASIC4.72□□□□□ -1.65
GPC3P51654 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.72□□□□□ -1.65
GPC3P51654 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.72□□□□□ -1.65
GPC3P51654 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.72□□□□□ -1.65
GPC3P51654 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.72□□□□□ -1.65
GPC3P51654 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.72□□□□□ -1.65
GPC3P51654 RN7SL600P-201ENST00000581811 299 ntBASIC4.72□□□□□ -1.65
GPC3P51654 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.72□□□□□ -1.65
GPC3P51654 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.72□□□□□ -1.65
GPC3P51654 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.72□□□□□ -1.65
GPC3P51654 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.72□□□□□ -1.65
GPC3P51654 KPNA2P2-201ENST00000419546 1489 ntBASIC4.72□□□□□ -1.65
GPC3P51654 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
GPC3P51654 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
GPC3P51654 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
GPC3P51654 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
GPC3P51654 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
GPC3P51654 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.72□□□□□ -1.65
GPC3P51654 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
GPC3P51654 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
GPC3P51654 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
GPC3P51654 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
GPC3P51654 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
GPC3P51654 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.71□□□□□ -1.66
GPC3P51654 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
GPC3P51654 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GPC3P51654 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
GPC3P51654 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GPC3P51654 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
GPC3P51654 SNORA57.1-201ENST00000391227 145 ntBASIC4.71□□□□□ -1.66
GPC3P51654 LAP3P1-201ENST00000403648 294 ntBASIC4.71□□□□□ -1.66
GPC3P51654 MIR1911-201ENST00000410783 80 ntBASIC4.71□□□□□ -1.66
GPC3P51654 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.71□□□□□ -1.66
GPC3P51654 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.71□□□□□ -1.66
GPC3P51654 EIF1P3-201ENST00000423841 334 ntBASIC4.71□□□□□ -1.66
GPC3P51654 COX6B1P7-201ENST00000430845 235 ntBASIC4.71□□□□□ -1.66
GPC3P51654 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.71□□□□□ -1.66
GPC3P51654 FGF7P3-201ENST00000454645 303 ntBASIC4.71□□□□□ -1.66
GPC3P51654 RPL23AP81-201ENST00000455252 467 ntBASIC4.71□□□□□ -1.66
GPC3P51654 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
GPC3P51654 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.71□□□□□ -1.66
GPC3P51654 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.71□□□□□ -1.66
GPC3P51654 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.71□□□□□ -1.66
GPC3P51654 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.71□□□□□ -1.66
GPC3P51654 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GPC3P51654 HMGB1P46-201ENST00000520062 610 ntBASIC4.71□□□□□ -1.66
GPC3P51654 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.71□□□□□ -1.66
GPC3P51654 AC022790.1-201ENST00000522872 204 ntBASIC4.71□□□□□ -1.66
GPC3P51654 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.71□□□□□ -1.66
GPC3P51654 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.71□□□□□ -1.66
GPC3P51654 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.71□□□□□ -1.66
GPC3P51654 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.71□□□□□ -1.66
GPC3P51654 BNIP3P5-201ENST00000562290 498 ntBASIC4.71□□□□□ -1.66
GPC3P51654 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.71□□□□□ -1.66
GPC3P51654 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.71□□□□□ -1.66
GPC3P51654 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.71□□□□□ -1.66
GPC3P51654 AC016911.1-201ENST00000613297 452 ntBASIC4.71□□□□□ -1.66
GPC3P51654 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
GPC3P51654 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.71□□□□□ -1.66
GPC3P51654 AC009032.1-201ENST00000617574 431 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms