Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.59□□□□□ -1.67
LHX1P48742 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.59□□□□□ -1.67
LHX1P48742 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LHX1P48742 MAPK10-349ENST00000641767 3661 ntBASIC4.59□□□□□ -1.67
LHX1P48742 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LHX1P48742 AC092435.4-201ENST00000623012 4159 ntBASIC4.59□□□□□ -1.67
LHX1P48742 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LHX1P48742 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LHX1P48742 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LHX1P48742 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.59□□□□□ -1.67
LHX1P48742 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.59□□□□□ -1.67
LHX1P48742 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.59□□□□□ -1.67
LHX1P48742 NRBF2P2-201ENST00000413087 861 ntBASIC4.59□□□□□ -1.67
LHX1P48742 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.59□□□□□ -1.67
LHX1P48742 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.59□□□□□ -1.67
LHX1P48742 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.59□□□□□ -1.67
LHX1P48742 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.59□□□□□ -1.67
LHX1P48742 RSL24D1P6-201ENST00000426934 401 ntBASIC4.59□□□□□ -1.67
LHX1P48742 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LHX1P48742 RPS27AP15-201ENST00000447672 466 ntBASIC4.59□□□□□ -1.67
LHX1P48742 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.59□□□□□ -1.67
LHX1P48742 RPS6P2-201ENST00000454208 705 ntBASIC4.59□□□□□ -1.67
LHX1P48742 NAMPTP2-201ENST00000505629 1115 ntBASIC4.59□□□□□ -1.67
LHX1P48742 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.59□□□□□ -1.67
LHX1P48742 KCTD9P2-201ENST00000512203 1013 ntBASIC4.59□□□□□ -1.67
LHX1P48742 MTCO3P27-201ENST00000514397 196 ntBASIC4.59□□□□□ -1.67
LHX1P48742 RNA5SP49-201ENST00000516450 115 ntBASIC4.59□□□□□ -1.67
LHX1P48742 HMGB1P19-201ENST00000517578 577 ntBASIC4.59□□□□□ -1.67
LHX1P48742 OR5AK3P-201ENST00000527486 1297 ntBASIC4.59□□□□□ -1.67
LHX1P48742 AP002812.4-201ENST00000532139 286 ntBASIC4.59□□□□□ -1.67
LHX1P48742 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.59□□□□□ -1.67
LHX1P48742 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LHX1P48742 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LHX1P48742 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.59□□□□□ -1.67
LHX1P48742 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LHX1P48742 AC021851.1-201ENST00000608537 1082 ntBASIC4.59□□□□□ -1.67
LHX1P48742 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.59□□□□□ -1.67
LHX1P48742 AL353726.1-201ENST00000614041 1000 ntBASIC4.59□□□□□ -1.67
LHX1P48742 MIR7973-1-201ENST00000614683 76 ntBASIC4.59□□□□□ -1.67
LHX1P48742 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.59□□□□□ -1.67
LHX1P48742 AL023881.1-201ENST00000621088 301 ntBASIC4.59□□□□□ -1.67
LHX1P48742 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.59□□□□□ -1.67
LHX1P48742 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
LHX1P48742 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.68
LHX1P48742 AC126323.6-202ENST00000568092 3511 ntBASIC4.59□□□□□ -1.68
LHX1P48742 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
LHX1P48742 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
LHX1P48742 Z95327.2-201ENST00000414579 1873 ntBASIC4.58□□□□□ -1.68
LHX1P48742 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LHX1P48742 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
LHX1P48742 AC005261.4-201ENST00000600047 1385 ntBASIC4.58□□□□□ -1.68
LHX1P48742 MIR383-201ENST00000362257 73 ntBASIC4.58□□□□□ -1.68
LHX1P48742 RNU1-14P-201ENST00000362759 152 ntBASIC4.58□□□□□ -1.68
LHX1P48742 RNU6-1176P-201ENST00000390955 107 ntBASIC4.58□□□□□ -1.68
LHX1P48742 RN7SKP235-201ENST00000410662 305 ntBASIC4.58□□□□□ -1.68
LHX1P48742 MIR1911-201ENST00000410783 80 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC069282.1-201ENST00000411911 526 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC013404.1-201ENST00000413068 249 ntBASIC4.58□□□□□ -1.68
LHX1P48742 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.58□□□□□ -1.68
LHX1P48742 TCEA1P4-201ENST00000415066 844 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.58□□□□□ -1.68
LHX1P48742 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.58□□□□□ -1.68
LHX1P48742 MFSD13B-201ENST00000420133 1290 ntBASIC4.58□□□□□ -1.68
LHX1P48742 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.58□□□□□ -1.68
LHX1P48742 ETF1P3-201ENST00000430422 1160 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.58□□□□□ -1.68
LHX1P48742 RPEP2-201ENST00000432149 701 ntBASIC4.58□□□□□ -1.68
LHX1P48742 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.58□□□□□ -1.68
LHX1P48742 AC006994.1-201ENST00000438212 839 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.58□□□□□ -1.68
LHX1P48742 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.58□□□□□ -1.68
LHX1P48742 AL096829.2-201ENST00000446582 742 ntBASIC4.58□□□□□ -1.68
LHX1P48742 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LHX1P48742 HMGN1P5-201ENST00000448591 263 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AL591363.1-201ENST00000450091 483 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC005229.2-201ENST00000456995 399 ntBASIC4.58□□□□□ -1.68
LHX1P48742 RPL7P22-201ENST00000466005 733 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC005912.1-201ENST00000495392 255 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC010627.1-201ENST00000503819 1294 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.58□□□□□ -1.68
LHX1P48742 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.58□□□□□ -1.68
LHX1P48742 AC108475.1-201ENST00000507880 950 ntBASIC4.58□□□□□ -1.68
LHX1P48742 PRELID3BP5-201ENST00000508612 460 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC112198.4-201ENST00000515450 351 ntBASIC4.58□□□□□ -1.68
LHX1P48742 RNU5A-7P-201ENST00000515979 116 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AP003355.1-201ENST00000518956 587 ntBASIC4.58□□□□□ -1.68
LHX1P48742 CYCSP29-201ENST00000533731 318 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.58□□□□□ -1.68
LHX1P48742 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.58□□□□□ -1.68
LHX1P48742 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.58□□□□□ -1.68
LHX1P48742 AC069366.1-201ENST00000583159 838 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LHX1P48742 AC006116.7-201ENST00000590141 756 ntBASIC4.58□□□□□ -1.68
LHX1P48742 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.58□□□□□ -1.68
LHX1P48742 AC124856.1-201ENST00000600819 896 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC092953.2-201ENST00000608000 699 ntBASIC4.58□□□□□ -1.68
LHX1P48742 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.58□□□□□ -1.68
LHX1P48742 VN1R9P-201ENST00000614184 867 ntBASIC4.58□□□□□ -1.68
LHX1P48742 AC016957.2-201ENST00000616998 848 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms