Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCP4P48539 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
PCP4P48539 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCP4P48539 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PCP4P48539 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCP4P48539 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCP4P48539 AP001541.1-201ENST00000623322 1904 ntBASIC3.82□□□□□ -1.8
PCP4P48539 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCP4P48539 HSPA8P1-201ENST00000425843 1833 ntBASIC3.81□□□□□ -1.8
PCP4P48539 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.81□□□□□ -1.8
PCP4P48539 AC027514.1-201ENST00000588561 1603 ntBASIC3.81□□□□□ -1.8
PCP4P48539 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCP4P48539 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PCP4P48539 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCP4P48539 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC3.81□□□□□ -1.8
PCP4P48539 SPATA22-209ENST00000572969 1399 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCP4P48539 PHF20L1-206ENST00000395376 2236 ntTSL 5 BASIC3.81□□□□□ -1.8
PCP4P48539 OR1S2-201ENST00000302592 978 ntBASIC3.81□□□□□ -1.8
PCP4P48539 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCP4P48539 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCP4P48539 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCP4P48539 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.81□□□□□ -1.8
PCP4P48539 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 RNU2-37P-201ENST00000410695 177 ntBASIC3.81□□□□□ -1.8
PCP4P48539 RNU2-8P-201ENST00000410727 190 ntBASIC3.81□□□□□ -1.8
PCP4P48539 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.81□□□□□ -1.8
PCP4P48539 UBE2FP1-201ENST00000416536 447 ntBASIC3.81□□□□□ -1.8
PCP4P48539 MTND3P17-201ENST00000416968 344 ntBASIC3.81□□□□□ -1.8
PCP4P48539 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 MTCO1P39-201ENST00000426148 480 ntBASIC3.81□□□□□ -1.8
PCP4P48539 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 VDAC2P3-201ENST00000430995 828 ntBASIC3.81□□□□□ -1.8
PCP4P48539 DSCR10-201ENST00000432141 860 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.81□□□□□ -1.8
PCP4P48539 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCP4P48539 AC079781.1-201ENST00000441505 394 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 LIN28AP2-201ENST00000445283 458 ntBASIC3.81□□□□□ -1.8
PCP4P48539 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.81□□□□□ -1.8
PCP4P48539 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.81□□□□□ -1.8
PCP4P48539 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC3.81□□□□□ -1.8
PCP4P48539 AC108059.3-201ENST00000456388 214 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 MT1DP-201ENST00000463480 191 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCP4P48539 RN7SL643P-201ENST00000471845 291 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 RN7SL481P-201ENST00000477764 299 ntBASIC3.81□□□□□ -1.8
PCP4P48539 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.81□□□□□ -1.8
PCP4P48539 RN7SL748P-201ENST00000483066 311 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC109462.1-201ENST00000491087 368 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC110792.1-201ENST00000491826 472 ntBASIC3.81□□□□□ -1.8
PCP4P48539 RPL23AP55-201ENST00000498163 452 ntBASIC3.81□□□□□ -1.8
PCP4P48539 RN7SL124P-201ENST00000498656 285 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC121161.2-201ENST00000502566 659 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC107401.1-201ENST00000503426 685 ntBASIC3.81□□□□□ -1.8
PCP4P48539 KCTD9P5-201ENST00000504141 1170 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC093810.1-201ENST00000505511 577 ntTSL 5 BASIC3.81□□□□□ -1.8
PCP4P48539 TRMT112P1-201ENST00000505515 351 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 AF186996.3-201ENST00000509527 964 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC004062.1-201ENST00000509926 645 ntBASIC3.81□□□□□ -1.8
PCP4P48539 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 SCARNA16.1-201ENST00000516133 183 ntBASIC3.81□□□□□ -1.8
PCP4P48539 Vault.3-201ENST00000516676 95 ntBASIC3.81□□□□□ -1.8
PCP4P48539 RNU6-64P-201ENST00000517119 105 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC008663.3-201ENST00000520300 457 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 AP000763.1-201ENST00000539481 325 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.81□□□□□ -1.8
PCP4P48539 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 POLE2-203ENST00000553805 496 ntTSL 2 BASIC3.81□□□□□ -1.8
PCP4P48539 RPL21P7-201ENST00000557463 483 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC104041.1-201ENST00000560054 569 ntTSL 5 BASIC3.81□□□□□ -1.8
PCP4P48539 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.81□□□□□ -1.8
PCP4P48539 FAM60BP-201ENST00000578364 658 ntBASIC3.81□□□□□ -1.8
PCP4P48539 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC011840.5-201ENST00000582125 771 ntBASIC3.81□□□□□ -1.8
PCP4P48539 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC3.81□□□□□ -1.8
PCP4P48539 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms