Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.53□□□□□ -1.68
SSR1P43307 DCAF13P1-201ENST00000495256 1330 ntBASIC4.53□□□□□ -1.68
SSR1P43307 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSR1P43307 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.53□□□□□ -1.68
SSR1P43307 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSR1P43307 RNU2-37P-201ENST00000410695 177 ntBASIC4.53□□□□□ -1.68
SSR1P43307 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.53□□□□□ -1.68
SSR1P43307 EIF1P3-201ENST00000423841 334 ntBASIC4.53□□□□□ -1.68
SSR1P43307 BRWD1P3-201ENST00000428816 390 ntBASIC4.53□□□□□ -1.68
SSR1P43307 ELOCP18-201ENST00000434209 337 ntBASIC4.53□□□□□ -1.68
SSR1P43307 Z85994.2-201ENST00000434327 452 ntBASIC4.53□□□□□ -1.68
SSR1P43307 RPL31P20-201ENST00000449593 360 ntBASIC4.53□□□□□ -1.68
SSR1P43307 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.53□□□□□ -1.68
SSR1P43307 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.53□□□□□ -1.68
SSR1P43307 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SSR1P43307 AC079804.1-201ENST00000461922 436 ntBASIC4.53□□□□□ -1.68
SSR1P43307 AC091917.2-201ENST00000505002 744 ntBASIC4.53□□□□□ -1.68
SSR1P43307 AC111000.3-201ENST00000508057 576 ntBASIC4.53□□□□□ -1.68
SSR1P43307 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.53□□□□□ -1.68
SSR1P43307 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.53□□□□□ -1.68
SSR1P43307 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
SSR1P43307 AC015795.1-201ENST00000513669 327 ntBASIC4.53□□□□□ -1.68
SSR1P43307 RNU2-58P-201ENST00000516403 183 ntBASIC4.53□□□□□ -1.68
SSR1P43307 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.53□□□□□ -1.68
SSR1P43307 AP000827.1-201ENST00000527814 258 ntBASIC4.53□□□□□ -1.68
SSR1P43307 HIGD1AP10-201ENST00000527837 282 ntBASIC4.53□□□□□ -1.68
SSR1P43307 CYP4A43P-201ENST00000568156 121 ntBASIC4.53□□□□□ -1.68
SSR1P43307 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.53□□□□□ -1.68
SSR1P43307 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.53□□□□□ -1.68
SSR1P43307 RPL12P25-202ENST00000598100 674 ntBASIC4.53□□□□□ -1.68
SSR1P43307 BMS1P7-201ENST00000602440 1052 ntBASIC4.53□□□□□ -1.68
SSR1P43307 AC019131.2-201ENST00000609071 870 ntBASIC4.53□□□□□ -1.68
SSR1P43307 AC012409.3-201ENST00000611343 981 ntBASIC4.53□□□□□ -1.68
SSR1P43307 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.53□□□□□ -1.68
SSR1P43307 U7.8-201ENST00000619968 63 ntBASIC4.53□□□□□ -1.68
SSR1P43307 ASNSP1-204ENST00000641977 1664 ntBASIC4.53□□□□□ -1.68
SSR1P43307 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.53□□□□□ -1.68
SSR1P43307 TNPO1P3-201ENST00000436471 2662 ntBASIC4.53□□□□□ -1.68
SSR1P43307 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSR1P43307 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SSR1P43307 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.52□□□□□ -1.69
SSR1P43307 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSR1P43307 AC097504.1-201ENST00000515103 2415 ntBASIC4.52□□□□□ -1.69
SSR1P43307 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSR1P43307 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.52□□□□□ -1.69
SSR1P43307 RNA5SP322-201ENST00000363617 119 ntBASIC4.52□□□□□ -1.69
SSR1P43307 RNA5SP505-201ENST00000364748 108 ntBASIC4.52□□□□□ -1.69
SSR1P43307 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.52□□□□□ -1.69
SSR1P43307 AC069218.2-201ENST00000411665 344 ntBASIC4.52□□□□□ -1.69
SSR1P43307 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSR1P43307 AL139095.3-201ENST00000419672 1203 ntBASIC4.52□□□□□ -1.69
SSR1P43307 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSR1P43307 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.52□□□□□ -1.69
SSR1P43307 MTCO1P45-201ENST00000431457 267 ntBASIC4.52□□□□□ -1.69
SSR1P43307 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.52□□□□□ -1.69
SSR1P43307 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSR1P43307 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.52□□□□□ -1.69
SSR1P43307 PHBP16-201ENST00000446318 950 ntBASIC4.52□□□□□ -1.69
SSR1P43307 AC005229.2-201ENST00000456995 399 ntBASIC4.52□□□□□ -1.69
SSR1P43307 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.52□□□□□ -1.69
SSR1P43307 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.52□□□□□ -1.69
SSR1P43307 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.52□□□□□ -1.69
SSR1P43307 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.52□□□□□ -1.69
SSR1P43307 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSR1P43307 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSR1P43307 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.52□□□□□ -1.69
SSR1P43307 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.52□□□□□ -1.69
SSR1P43307 AC069366.1-201ENST00000583159 838 ntBASIC4.52□□□□□ -1.69
SSR1P43307 AC020915.5-201ENST00000596836 964 ntBASIC4.52□□□□□ -1.69
SSR1P43307 AC025175.1-201ENST00000606482 759 ntBASIC4.52□□□□□ -1.69
SSR1P43307 AL590410.1-201ENST00000617925 333 ntBASIC4.52□□□□□ -1.69
SSR1P43307 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
SSR1P43307 SAGE2P-201ENST00000420011 2126 ntBASIC4.52□□□□□ -1.69
SSR1P43307 AC119744.1-201ENST00000454746 1715 ntBASIC4.52□□□□□ -1.69
SSR1P43307 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.52□□□□□ -1.69
SSR1P43307 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SSR1P43307 RPS4XP5-202ENST00000449995 1334 ntBASIC4.51□□□□□ -1.69
SSR1P43307 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
SSR1P43307 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SSR1P43307 AC079741.1-201ENST00000321498 212 ntBASIC4.51□□□□□ -1.69
SSR1P43307 RNU6-1251P-201ENST00000364502 107 ntBASIC4.51□□□□□ -1.69
SSR1P43307 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SSR1P43307 RNA5SP332-201ENST00000391063 115 ntBASIC4.51□□□□□ -1.69
SSR1P43307 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.51□□□□□ -1.69
SSR1P43307 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.51□□□□□ -1.69
SSR1P43307 AL049610.1-201ENST00000423374 372 ntBASIC4.51□□□□□ -1.69
SSR1P43307 RBMY1KP-201ENST00000423480 476 ntBASIC4.51□□□□□ -1.69
SSR1P43307 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.51□□□□□ -1.69
SSR1P43307 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSR1P43307 RPS26P40-201ENST00000435209 294 ntBASIC4.51□□□□□ -1.69
SSR1P43307 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.51□□□□□ -1.69
SSR1P43307 RPL7P32-201ENST00000457119 744 ntBASIC4.51□□□□□ -1.69
SSR1P43307 RN7SL330P-201ENST00000469709 307 ntBASIC4.51□□□□□ -1.69
SSR1P43307 AC023050.1-201ENST00000498198 304 ntBASIC4.51□□□□□ -1.69
SSR1P43307 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.51□□□□□ -1.69
SSR1P43307 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.51□□□□□ -1.69
SSR1P43307 AK3P4-201ENST00000504283 583 ntBASIC4.51□□□□□ -1.69
SSR1P43307 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.51□□□□□ -1.69
SSR1P43307 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.51□□□□□ -1.69
SSR1P43307 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms