Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC025627.2-201ENST00000576220 160 ntBASIC3.98□□□□□ -1.77
RPA3P35244 SNX6P1-201ENST00000601728 1224 ntBASIC3.98□□□□□ -1.77
RPA3P35244 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPA3P35244 AC131238.1-201ENST00000617135 328 ntBASIC3.98□□□□□ -1.77
RPA3P35244 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPA3P35244 AC090506.2-201ENST00000624521 419 ntBASIC3.98□□□□□ -1.77
RPA3P35244 OR52H1-202ENST00000641796 1061 ntBASIC3.98□□□□□ -1.77
RPA3P35244 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPA3P35244 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPA3P35244 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RPA3P35244 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.97□□□□□ -1.77
RPA3P35244 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPA3P35244 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPA3P35244 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPA3P35244 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
RPA3P35244 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPA3P35244 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RPA3P35244 SNORA60-201ENST00000362396 134 ntBASIC3.97□□□□□ -1.77
RPA3P35244 SNORA70.2-201ENST00000364506 135 ntBASIC3.97□□□□□ -1.77
RPA3P35244 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPA3P35244 AL022722.2-201ENST00000402519 180 ntBASIC3.97□□□□□ -1.77
RPA3P35244 RAB28P1-201ENST00000411517 641 ntBASIC3.97□□□□□ -1.77
RPA3P35244 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.97□□□□□ -1.77
RPA3P35244 AC093084.1-201ENST00000424233 687 ntBASIC3.97□□□□□ -1.77
RPA3P35244 RPL23AP4-201ENST00000427757 463 ntBASIC3.97□□□□□ -1.77
RPA3P35244 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.97□□□□□ -1.77
RPA3P35244 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.97□□□□□ -1.77
RPA3P35244 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.97□□□□□ -1.77
RPA3P35244 HMGB1P37-201ENST00000439613 609 ntBASIC3.97□□□□□ -1.77
RPA3P35244 AC092809.1-201ENST00000441469 474 ntBASIC3.97□□□□□ -1.77
RPA3P35244 OR6C72P-201ENST00000451403 892 ntBASIC3.97□□□□□ -1.77
RPA3P35244 AC010307.1-201ENST00000467206 836 ntBASIC3.97□□□□□ -1.77
RPA3P35244 RPL7P19-201ENST00000469948 618 ntBASIC3.97□□□□□ -1.77
RPA3P35244 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPA3P35244 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.97□□□□□ -1.77
RPA3P35244 RNU4-18P-201ENST00000516751 149 ntBASIC3.97□□□□□ -1.77
RPA3P35244 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.97□□□□□ -1.77
RPA3P35244 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.97□□□□□ -1.77
RPA3P35244 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.97□□□□□ -1.77
RPA3P35244 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.97□□□□□ -1.77
RPA3P35244 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.97□□□□□ -1.77
RPA3P35244 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RPA3P35244 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.97□□□□□ -1.77
RPA3P35244 AL133457.1-201ENST00000564251 987 ntBASIC3.97□□□□□ -1.77
RPA3P35244 AL590392.1-201ENST00000604960 446 ntBASIC3.97□□□□□ -1.77
RPA3P35244 BRDTP1-201ENST00000605735 677 ntBASIC3.97□□□□□ -1.77
RPA3P35244 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RPA3P35244 MIR7151-201ENST00000617477 60 ntBASIC3.97□□□□□ -1.77
RPA3P35244 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.97□□□□□ -1.77
RPA3P35244 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.97□□□□□ -1.77
RPA3P35244 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RPA3P35244 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.97□□□□□ -1.77
RPA3P35244 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPA3P35244 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
RPA3P35244 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.96□□□□□ -1.77
RPA3P35244 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPA3P35244 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPA3P35244 AL121657.1-201ENST00000327215 531 ntBASIC3.96□□□□□ -1.78
RPA3P35244 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPA3P35244 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.96□□□□□ -1.78
RPA3P35244 AC068538.1-201ENST00000376856 336 ntBASIC3.96□□□□□ -1.78
RPA3P35244 ENSAP1-201ENST00000392855 326 ntBASIC3.96□□□□□ -1.78
RPA3P35244 RPL23AP48-201ENST00000406913 488 ntBASIC3.96□□□□□ -1.78
RPA3P35244 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPA3P35244 HSPE1P12-201ENST00000412576 301 ntBASIC3.96□□□□□ -1.78
RPA3P35244 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.96□□□□□ -1.78
RPA3P35244 AC073136.2-201ENST00000417282 849 ntBASIC3.96□□□□□ -1.78
RPA3P35244 RCC2P2-201ENST00000422174 918 ntBASIC3.96□□□□□ -1.78
RPA3P35244 OR5BE1P-201ENST00000425977 939 ntBASIC3.96□□□□□ -1.78
RPA3P35244 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.96□□□□□ -1.78
RPA3P35244 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.96□□□□□ -1.78
RPA3P35244 RPL7P28-201ENST00000437739 740 ntBASIC3.96□□□□□ -1.78
RPA3P35244 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.96□□□□□ -1.78
RPA3P35244 RPS4XP4-201ENST00000443195 763 ntBASIC3.96□□□□□ -1.78
RPA3P35244 RPS17P13-201ENST00000448974 407 ntBASIC3.96□□□□□ -1.78
RPA3P35244 AC092691.2-201ENST00000461787 803 ntBASIC3.96□□□□□ -1.78
RPA3P35244 UBA52P3-201ENST00000491303 382 ntBASIC3.96□□□□□ -1.78
RPA3P35244 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.96□□□□□ -1.78
RPA3P35244 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.96□□□□□ -1.78
RPA3P35244 AC092593.2-201ENST00000513866 913 ntBASIC3.96□□□□□ -1.78
RPA3P35244 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPA3P35244 OR8X1P-201ENST00000534542 869 ntBASIC3.96□□□□□ -1.78
RPA3P35244 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.96□□□□□ -1.78
RPA3P35244 AC025884.1-201ENST00000556034 378 ntBASIC3.96□□□□□ -1.78
RPA3P35244 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.96□□□□□ -1.78
RPA3P35244 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPA3P35244 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.96□□□□□ -1.78
RPA3P35244 AC099489.2-201ENST00000574976 260 ntBASIC3.96□□□□□ -1.78
RPA3P35244 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.96□□□□□ -1.78
RPA3P35244 RN7SL600P-201ENST00000581811 299 ntBASIC3.96□□□□□ -1.78
RPA3P35244 AL390816.3-201ENST00000604527 1066 ntBASIC3.96□□□□□ -1.78
RPA3P35244 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPA3P35244 AC105105.5-201ENST00000622635 1294 ntBASIC3.96□□□□□ -1.78
RPA3P35244 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.96□□□□□ -1.78
RPA3P35244 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.96□□□□□ -1.78
RPA3P35244 AC244205.2-202ENST00000635781 342 ntBASIC3.96□□□□□ -1.78
RPA3P35244 OR5BE1P-202ENST00000641168 1176 ntBASIC3.96□□□□□ -1.78
RPA3P35244 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RPA3P35244 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RPA3P35244 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms