Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 UQCRBP1-201ENST00000421129 336 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 MORF4L1P7-201ENST00000426038 703 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 DNAJC19P7-201ENST00000428811 344 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 RPL23AP1-201ENST00000428990 471 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN6P29350 RPL23AP93-201ENST00000440847 484 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN6P29350 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN6P29350 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN6P29350 MTND2P30-201ENST00000456663 382 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN6P29350 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN6P29350 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN6P29350 RPL30P11-201ENST00000495304 339 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN6P29350 AK3P4-201ENST00000504283 583 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN6P29350 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.19□□□□□ -1.74
PTPN6P29350 CIR1P1-201ENST00000524055 1133 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 AP000827.1-201ENST00000527814 258 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 AP001781.1-201ENST00000530977 207 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN6P29350 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPN6P29350 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.19□□□□□ -1.74
PTPN6P29350 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN6P29350 AC069061.3-201ENST00000582254 823 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPN6P29350 AC067852.4-201ENST00000590314 478 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.19□□□□□ -1.74
PTPN6P29350 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN6P29350 SNX18P1Y-201ENST00000616231 511 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPN6P29350 U6.48-201ENST00000618523 106 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPN6P29350 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPN6P29350 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN6P29350 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN6P29350 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
PTPN6P29350 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPN6P29350 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PTPN6P29350 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.19□□□□□ -1.74
PTPN6P29350 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPN6P29350 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.19□□□□□ -1.74
PTPN6P29350 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN6P29350 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
PTPN6P29350 OR56B2P-202ENST00000641377 2453 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN6P29350 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PTPN6P29350 AC138393.1-206ENST00000540997 1886 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN6P29350 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 RNU1-32P-201ENST00000363937 159 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 MIR129-1-201ENST00000384972 72 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PTPN6P29350 AL357078.2-201ENST00000416486 427 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN6P29350 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN6P29350 AL139095.3-201ENST00000419672 1203 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AC073335.1-201ENST00000427776 363 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 HLA-N-201ENST00000437516 135 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 ACTR3P2-201ENST00000439585 1257 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 UBE2V1P3-201ENST00000439651 417 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AC092685.1-201ENST00000447960 1243 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PTPN6P29350 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN6P29350 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN6P29350 ABCF2P2-201ENST00000450549 296 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN6P29350 NPM1P17-201ENST00000479221 602 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN6P29350 FTH1P24-201ENST00000503502 462 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN6P29350 OR5H4P-201ENST00000510851 923 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN6P29350 OR8K2P-201ENST00000524645 927 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN6P29350 AC025260.1-201ENST00000548858 430 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.18□□□□□ -1.74
PTPN6P29350 MIR5096-201ENST00000583713 70 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN6P29350 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPN6P29350 AC010680.4-201ENST00000605334 543 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AL023583.1-201ENST00000607518 1143 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AL031666.3-201ENST00000609320 1006 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN6P29350 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPN6P29350 AC067931.1-201ENST00000624190 671 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AL049536.1-201ENST00000625043 744 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN6P29350 FRG1DP-201ENST00000635586 771 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 AC022031.1-201ENST00000585985 2593 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 A2MP1-204ENST00000566278 4130 ntBASIC4.18□□□□□ -1.74
PTPN6P29350 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN6P29350 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPN6P29350 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN6P29350 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPN6P29350 DCAF13P3-201ENST00000561147 1334 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms