Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
ABCD3P28288 AC011447.7-201ENST00000624228 1590 ntBASIC4.64□□□□□ -1.67
ABCD3P28288 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ABCD3P28288 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ABCD3P28288 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ABCD3P28288 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
ABCD3P28288 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 Z73965.1-201ENST00000623412 2297 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCD3P28288 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.63□□□□□ -1.67
ABCD3P28288 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
ABCD3P28288 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 AC016769.2-201ENST00000414815 475 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 RPS3AP9-201ENST00000417027 792 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCD3P28288 RBMY2QP-201ENST00000429799 1147 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 MOB1AP1-201ENST00000430903 535 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 AC241584.1-201ENST00000438469 1241 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCD3P28288 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCD3P28288 OFD1P3Y-201ENST00000453312 783 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 AL645937.3-201ENST00000453647 936 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCD3P28288 AC245028.2-201ENST00000458673 253 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 RN7SL329P-201ENST00000467740 299 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 AC087879.1-201ENST00000474343 374 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
ABCD3P28288 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCD3P28288 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCD3P28288 AC012339.2-201ENST00000523996 453 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
ABCD3P28288 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.63□□□□□ -1.67
ABCD3P28288 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCD3P28288 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.63□□□□□ -1.67
ABCD3P28288 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.63□□□□□ -1.67
ABCD3P28288 AC090695.1-201ENST00000561269 1222 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 MIR4504-201ENST00000577413 92 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCD3P28288 AC006116.5-201ENST00000591936 559 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 AL158163.2-201ENST00000619110 700 ntBASIC4.63□□□□□ -1.67
ABCD3P28288 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
ABCD3P28288 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCD3P28288 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ABCD3P28288 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.62□□□□□ -1.67
ABCD3P28288 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ABCD3P28288 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.62□□□□□ -1.67
ABCD3P28288 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ABCD3P28288 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.62□□□□□ -1.67
ABCD3P28288 ECM1P2-201ENST00000503354 1577 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 ZNF33CP-201ENST00000432492 2030 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ABCD3P28288 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ABCD3P28288 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
ABCD3P28288 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ABCD3P28288 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ABCD3P28288 RNA5SP428-201ENST00000365129 132 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 SUGT1P1-201ENST00000379514 476 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 SNORA70.10-201ENST00000384515 134 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 AP002530.1-201ENST00000405705 684 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.62□□□□□ -1.67
ABCD3P28288 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.62□□□□□ -1.67
ABCD3P28288 AC004448.2-201ENST00000422360 586 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 AC096632.1-201ENST00000427395 310 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.62□□□□□ -1.67
ABCD3P28288 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.62□□□□□ -1.67
ABCD3P28288 CR769776.1-201ENST00000441254 787 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 RPL7AP61-201ENST00000443410 636 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 AL137845.2-201ENST00000444292 988 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 COX6CP18-201ENST00000448769 222 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.62□□□□□ -1.67
ABCD3P28288 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.62□□□□□ -1.67
ABCD3P28288 AC108734.3-201ENST00000481241 1165 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 AC114322.1-201ENST00000506771 926 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 MTCYBP16-201ENST00000509187 1129 ntBASIC4.62□□□□□ -1.67
ABCD3P28288 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms