Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC105148.1-201ENST00000604961 409 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 AC019193.2-201ENST00000610012 634 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC008759.3-201ENST00000613300 508 ntBASIC4.5□□□□□ -1.69
CDH3P22223 VN1R9P-201ENST00000614184 867 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC011472.4-201ENST00000615848 491 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH3P22223 RMST_10.1-201ENST00000616309 154 ntBASIC4.5□□□□□ -1.69
CDH3P22223 RMST_9.1-201ENST00000619945 193 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AL356121.2-201ENST00000624715 780 ntBASIC4.5□□□□□ -1.69
CDH3P22223 U3.53-201ENST00000628922 216 ntBASIC4.5□□□□□ -1.69
CDH3P22223 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH3P22223 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDH3P22223 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDH3P22223 AL359922.3-201ENST00000624779 1670 ntBASIC4.5□□□□□ -1.69
CDH3P22223 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH3P22223 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CDH3P22223 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH3P22223 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH3P22223 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH3P22223 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
CDH3P22223 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH3P22223 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH3P22223 RNU1-83P-201ENST00000363426 164 ntBASIC4.49□□□□□ -1.69
CDH3P22223 SNORD56.4-201ENST00000363883 71 ntBASIC4.49□□□□□ -1.69
CDH3P22223 SNORD113.2-201ENST00000364166 89 ntBASIC4.49□□□□□ -1.69
CDH3P22223 SNORA70F-201ENST00000384142 135 ntBASIC4.49□□□□□ -1.69
CDH3P22223 RNU6-1257P-201ENST00000384625 110 ntBASIC4.49□□□□□ -1.69
CDH3P22223 RNA5SP397-201ENST00000391323 118 ntBASIC4.49□□□□□ -1.69
CDH3P22223 RNA5SP104-201ENST00000410989 118 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC016397.1-201ENST00000412463 242 ntBASIC4.49□□□□□ -1.69
CDH3P22223 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH3P22223 AC009480.2-201ENST00000422916 432 ntBASIC4.49□□□□□ -1.69
CDH3P22223 EIF4HP2-201ENST00000424380 563 ntBASIC4.49□□□□□ -1.69
CDH3P22223 CENPIP1-201ENST00000425713 902 ntBASIC4.49□□□□□ -1.69
CDH3P22223 PPIAP13-201ENST00000434706 478 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH3P22223 AL162591.2-201ENST00000449634 317 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH3P22223 AC005229.2-201ENST00000456995 399 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH3P22223 RPL21P18-201ENST00000469899 480 ntBASIC4.49□□□□□ -1.69
CDH3P22223 RPL36AP41-201ENST00000493820 306 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AK3P4-201ENST00000504283 583 ntBASIC4.49□□□□□ -1.69
CDH3P22223 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH3P22223 AP003066.2-201ENST00000529375 555 ntBASIC4.49□□□□□ -1.69
CDH3P22223 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH3P22223 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH3P22223 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH3P22223 AC012254.4-201ENST00000588843 273 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH3P22223 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH3P22223 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH3P22223 AC073091.2-201ENST00000603205 907 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC093765.1-201ENST00000603758 881 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC010680.3-201ENST00000604215 520 ntBASIC4.49□□□□□ -1.69
CDH3P22223 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH3P22223 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH3P22223 AC245100.7-201ENST00000609678 442 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC100847.1-201ENST00000611316 481 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC104763.3-201ENST00000613765 618 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC123768.4-201ENST00000616244 701 ntBASIC4.49□□□□□ -1.69
CDH3P22223 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH3P22223 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH3P22223 AC007275.1-201ENST00000621243 671 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC093875.1-201ENST00000623688 504 ntBASIC4.49□□□□□ -1.69
CDH3P22223 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH3P22223 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH3P22223 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH3P22223 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH3P22223 AC017007.4-201ENST00000503353 1352 ntBASIC4.49□□□□□ -1.69
CDH3P22223 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH3P22223 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH3P22223 AL136964.1-201ENST00000622038 2990 ntBASIC4.48□□□□□ -1.69
CDH3P22223 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH3P22223 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH3P22223 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CDH3P22223 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDH3P22223 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH3P22223 RNU4-31P-201ENST00000384211 141 ntBASIC4.48□□□□□ -1.69
CDH3P22223 RNU6-185P-201ENST00000384421 107 ntBASIC4.48□□□□□ -1.69
CDH3P22223 RNU6-925P-201ENST00000384629 104 ntBASIC4.48□□□□□ -1.69
CDH3P22223 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH3P22223 RNA5SP498-201ENST00000411342 120 ntBASIC4.48□□□□□ -1.69
CDH3P22223 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH3P22223 FAR2P2-201ENST00000413041 594 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AC009965.2-201ENST00000425328 970 ntBASIC4.48□□□□□ -1.69
CDH3P22223 FAR2P4-202ENST00000425399 584 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AC013262.1-201ENST00000426710 252 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH3P22223 FO393419.3-201ENST00000428741 282 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH3P22223 RPL7P33-201ENST00000444159 742 ntBASIC4.48□□□□□ -1.69
CDH3P22223 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH3P22223 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms