Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC103987.1-201ENST00000473394 348 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 AC068587.1-201ENST00000483613 781 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 RPS26P15-201ENST00000488067 348 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 RN7SL691P-201ENST00000494487 301 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 AC010374.1-201ENST00000503762 1237 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.22□□□□□ -1.73
XRCC1P18887 AC025554.1-201ENST00000505641 188 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 AC108471.1-201ENST00000513977 287 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 SNORA26.10-201ENST00000516427 141 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 RNA5SP73-201ENST00000516744 108 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.22□□□□□ -1.73
XRCC1P18887 CYCSP29-201ENST00000533731 318 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.22□□□□□ -1.73
XRCC1P18887 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.22□□□□□ -1.73
XRCC1P18887 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.22□□□□□ -1.73
XRCC1P18887 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
XRCC1P18887 AC011477.5-201ENST00000586571 259 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
XRCC1P18887 ARF4P1-201ENST00000605447 541 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 AL021368.1-201ENST00000607490 540 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 AC092653.1-201ENST00000608509 531 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 AC011472.4-201ENST00000615848 491 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 FP325313.1-201ENST00000638228 703 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.22□□□□□ -1.73
XRCC1P18887 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
XRCC1P18887 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
XRCC1P18887 AL445437.1-201ENST00000623157 3087 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
XRCC1P18887 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.21□□□□□ -1.73
XRCC1P18887 AC009313.2-201ENST00000417893 1941 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
XRCC1P18887 AC097504.1-201ENST00000515103 2415 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
XRCC1P18887 AC097374.1-203ENST00000400783 485 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 RPL23AP48-201ENST00000406913 488 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.21□□□□□ -1.74
XRCC1P18887 NRBF2P2-201ENST00000413087 861 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
XRCC1P18887 RPL6P29-201ENST00000414863 865 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 TRGV6-201ENST00000417928 299 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.21□□□□□ -1.74
XRCC1P18887 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.21□□□□□ -1.74
XRCC1P18887 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
XRCC1P18887 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.21□□□□□ -1.74
XRCC1P18887 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.21□□□□□ -1.74
XRCC1P18887 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.21□□□□□ -1.74
XRCC1P18887 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
XRCC1P18887 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.21□□□□□ -1.74
XRCC1P18887 RPL7AP52-201ENST00000458096 790 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 AC008958.1-201ENST00000511047 682 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.21□□□□□ -1.74
XRCC1P18887 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.21□□□□□ -1.74
XRCC1P18887 HIGD1AP18-201ENST00000520730 278 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 TOMM20P2-201ENST00000540082 421 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 AC008083.2-201ENST00000546707 476 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.21□□□□□ -1.74
XRCC1P18887 AC069366.1-201ENST00000583159 838 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.21□□□□□ -1.74
XRCC1P18887 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.21□□□□□ -1.74
XRCC1P18887 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.21□□□□□ -1.74
XRCC1P18887 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
XRCC1P18887 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.21□□□□□ -1.74
XRCC1P18887 FAM27D1-201ENST00000612308 341 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.21□□□□□ -1.74
XRCC1P18887 AC233309.1-201ENST00000619522 751 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
XRCC1P18887 AC007342.8-201ENST00000623278 678 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 AC019278.1-201ENST00000623516 479 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 AL356121.2-201ENST00000624715 780 ntBASIC4.21□□□□□ -1.74
XRCC1P18887 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
XRCC1P18887 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
XRCC1P18887 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
XRCC1P18887 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
XRCC1P18887 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
XRCC1P18887 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.2□□□□□ -1.74
XRCC1P18887 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.2□□□□□ -1.74
XRCC1P18887 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
XRCC1P18887 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
XRCC1P18887 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
XRCC1P18887 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
XRCC1P18887 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.2□□□□□ -1.74
XRCC1P18887 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
XRCC1P18887 AC005261.4-201ENST00000600047 1385 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 AC009501.3-201ENST00000605001 1352 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 MIR383-201ENST00000362257 73 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 SNORA70C-201ENST00000384538 135 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
XRCC1P18887 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.2□□□□□ -1.74
XRCC1P18887 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.2□□□□□ -1.74
XRCC1P18887 AL160175.1-201ENST00000428124 247 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.2□□□□□ -1.74
XRCC1P18887 XKRY2-201ENST00000442362 1093 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.2□□□□□ -1.74
XRCC1P18887 RPL23AP81-201ENST00000455252 467 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 RNU7-27P-201ENST00000459281 62 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 CCDC75P1-201ENST00000469247 791 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 AC093663.2-201ENST00000484625 313 ntBASIC4.2□□□□□ -1.74
XRCC1P18887 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.2□□□□□ -1.74
XRCC1P18887 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms