Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC012065.4-201ENST00000602445 679 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC068870.2-201ENST00000620635 389 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC010338.1-201ENST00000621823 717 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC009033.1-201ENST00000624279 431 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 ASNSP1-204ENST00000641977 1664 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.59□□□□□ -1.2
CSB-PGBD3P0DP91 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 RNA5SP183-201ENST00000362452 119 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 RN7SKP115-201ENST00000363177 317 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 Y_RNA.302-201ENST00000364997 102 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 RNA5SP30-201ENST00000365552 115 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AL133270.1-201ENST00000402635 279 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 MIR1284-201ENST00000408337 120 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 METTL15P3-201ENST00000415522 1221 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AL731534.1-201ENST00000434711 269 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 CBX1P4-201ENST00000439415 457 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 RPS20P24-201ENST00000457473 361 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 RPL23AP12-201ENST00000467573 473 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 RPS18P6-201ENST00000476880 458 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 RPL7P38-201ENST00000488396 739 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 RNF138P1-201ENST00000502765 546 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AC010342.1-201ENST00000514047 877 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 IGKV2-36-201ENST00000519999 223 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AP002373.2-201ENST00000541631 1060 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 MIR3691-201ENST00000578066 90 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 AC087516.1-201ENST00000561236 2428 ntBASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CSB-PGBD3P0DP91 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 U8.4-201ENST00000363626 134 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 SNORD8-201ENST00000363915 110 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 RNU6-374P-201ENST00000364146 108 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 RNU6-660P-201ENST00000364566 109 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 Y_RNA.263-201ENST00000364659 114 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 SUGT1P1-201ENST00000379514 476 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 SNORD116-23-201ENST00000384645 92 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 MIR550A3-201ENST00000390735 95 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 RPL37P18-201ENST00000411602 243 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 OR52B5P-201ENST00000435337 951 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 AL772161.1-201ENST00000439130 476 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 RPL35AP28-201ENST00000459730 331 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 AL442663.2-201ENST00000554385 511 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 AC006960.3-201ENST00000561845 705 ntBASIC7.57□□□□□ -1.2
CSB-PGBD3P0DP91 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms