Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC005868.1-201ENST00000536421 331 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC006518.2-201ENST00000542513 940 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 MTND4LP24-201ENST00000572277 291 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AP005119.2-201ENST00000579735 1105 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC069061.3-201ENST00000582254 823 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 RPL12P25-202ENST00000598100 674 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC103591.3-201ENST00000608684 209 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC091965.5-201ENST00000624785 342 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 AC084035.1-201ENST00000634543 607 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 AL137100.1-201ENST00000556703 1620 ntBASIC5.58□□□□□ -1.52
HLA-DOAP06340 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DOAP06340 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DOAP06340 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DOAP06340 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DOAP06340 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DOAP06340 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 RNU6-244P-201ENST00000391028 104 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 ATP5F1P3-201ENST00000397213 657 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 UQCRBP1-201ENST00000421129 336 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC246680.2-201ENST00000422106 389 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AL365203.2-201ENST00000423444 196 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 RAC1P8-201ENST00000427086 527 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 ISCA1P2-201ENST00000438679 421 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC023512.1-201ENST00000444513 499 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 HMGB3P6-201ENST00000444896 598 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 OR51B8P-201ENST00000449892 769 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC092754.2-201ENST00000463506 460 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC090142.1-201ENST00000465776 462 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC108734.3-201ENST00000481241 1165 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 RPL36AP41-201ENST00000493820 306 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC025164.1-201ENST00000496249 478 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC080014.1-201ENST00000496877 1201 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 RPL12P22-201ENST00000519073 490 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 PDCL2P2-201ENST00000533651 189 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC084824.1-201ENST00000550917 1005 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC105129.1-201ENST00000560250 297 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC012213.3-201ENST00000577199 777 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 AP001981.2-201ENST00000603241 418 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 AL133338.2-201ENST00000604292 736 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC022306.2-201ENST00000617563 647 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AP004607.9-201ENST00000618202 316 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC092184.1-201ENST00000625042 715 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 U3.53-201ENST00000628922 216 ntBASIC5.57□□□□□ -1.52
HLA-DOAP06340 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DOAP06340 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DOAP06340 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DOAP06340 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DOAP06340 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AC096656.1-201ENST00000623826 1364 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 OR56B2P-202ENST00000641377 2453 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DOAP06340 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AC108467.2-201ENST00000617640 1597 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DOAP06340 AL121950.1-201ENST00000624993 2077 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 RNU6-236P-201ENST00000363886 106 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 SNORD65C-201ENST00000390962 71 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 RNA5SP105-201ENST00000391123 113 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 RNU6-192P-201ENST00000391253 100 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 RSL24D1P4-201ENST00000400938 484 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DOAP06340 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 FO393419.3-201ENST00000428741 282 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 ETF1P3-201ENST00000430422 1160 ntBASIC5.56□□□□□ -1.52
HLA-DOAP06340 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms