Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC093249.4-201ENST00000564755 259 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 AC135628.1-201ENST00000568867 534 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 AC091042.1-201ENST00000579213 173 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 MIR3667-201ENST00000581025 74 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.22□□□□□ -1.73
LMX1BO60663 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
LMX1BO60663 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.22□□□□□ -1.73
LMX1BO60663 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.22□□□□□ -1.73
LMX1BO60663 AC121247.2-201ENST00000604776 136 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 MEMO1P5-201ENST00000604810 406 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 AL158042.1-201ENST00000605338 460 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 AC011939.3-201ENST00000613686 466 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 AC092140.2-201ENST00000618027 521 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 AL158163.2-201ENST00000619110 700 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 AC131159.1-201ENST00000621854 213 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.22□□□□□ -1.73
LMX1BO60663 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LMX1BO60663 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.22□□□□□ -1.73
LMX1BO60663 AC007671.2-201ENST00000637344 619 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 AC103706.2-201ENST00000638080 240 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 LINC01808-202ENST00000641680 1116 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.22□□□□□ -1.73
LMX1BO60663 AC008758.3-201ENST00000507003 1829 ntBASIC4.22□□□□□ -1.73
LMX1BO60663 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.22□□□□□ -1.73
LMX1BO60663 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.22□□□□□ -1.73
LMX1BO60663 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LMX1BO60663 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.22□□□□□ -1.73
LMX1BO60663 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LMX1BO60663 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
LMX1BO60663 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
LMX1BO60663 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMX1BO60663 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMX1BO60663 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LMX1BO60663 AC079741.1-201ENST00000321498 212 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 RNA5SP505-201ENST00000364748 108 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
LMX1BO60663 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.21□□□□□ -1.74
LMX1BO60663 MT-TP-201ENST00000387461 68 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 Y_RNA.578-201ENST00000390903 88 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 RSL24D1P4-201ENST00000400938 484 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 ERHP2-201ENST00000402323 299 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AL356131.1-201ENST00000405826 414 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 FCF1P5-201ENST00000406490 482 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 RNU4-72P-201ENST00000410754 173 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 RAP1BP1-201ENST00000412709 553 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 SETP15-201ENST00000412724 337 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.21□□□□□ -1.74
LMX1BO60663 AC027644.1-201ENST00000419595 298 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 MFSD13B-201ENST00000420133 1290 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AC009480.2-201ENST00000422916 432 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 HIGD1AP12-201ENST00000427832 281 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.21□□□□□ -1.74
LMX1BO60663 MOB1AP1-201ENST00000430903 535 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.21□□□□□ -1.74
LMX1BO60663 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.21□□□□□ -1.74
LMX1BO60663 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.21□□□□□ -1.74
LMX1BO60663 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.21□□□□□ -1.74
LMX1BO60663 AL031584.1-201ENST00000447169 754 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.21□□□□□ -1.74
LMX1BO60663 AC233982.1-201ENST00000451247 436 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AL513533.1-201ENST00000453728 415 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.21□□□□□ -1.74
LMX1BO60663 AC006967.1-201ENST00000467608 589 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AC112206.1-201ENST00000468416 477 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 RPL23AP44-201ENST00000482216 473 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AC068587.1-201ENST00000483613 781 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.21□□□□□ -1.74
LMX1BO60663 AC119751.1-201ENST00000513357 765 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.21□□□□□ -1.74
LMX1BO60663 RNU6-709P-201ENST00000517257 104 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 IGKV1-32-201ENST00000519290 311 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 C1GALT1P3-201ENST00000522049 819 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMX1BO60663 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.21□□□□□ -1.74
LMX1BO60663 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.21□□□□□ -1.74
LMX1BO60663 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.21□□□□□ -1.74
LMX1BO60663 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMX1BO60663 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.21□□□□□ -1.74
LMX1BO60663 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.21□□□□□ -1.74
LMX1BO60663 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.21□□□□□ -1.74
LMX1BO60663 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.21□□□□□ -1.74
LMX1BO60663 AP003392.5-201ENST00000607857 415 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AL451049.1-201ENST00000608672 497 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 TUSC7.1-201ENST00000610969 165 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AC024257.5-201ENST00000612739 531 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 MIR6780A-201ENST00000615089 68 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 FRG1HP-204ENST00000617940 757 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 AC009704.2-201ENST00000618739 483 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMX1BO60663 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
LMX1BO60663 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMX1BO60663 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
LMX1BO60663 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LMX1BO60663 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LMX1BO60663 AL034370.1-201ENST00000397254 1590 ntBASIC4.21□□□□□ -1.74
LMX1BO60663 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LMX1BO60663 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.21□□□□□ -1.74
LMX1BO60663 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LMX1BO60663 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LMX1BO60663 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms