Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC010435.1-201ENST00000623353 1177 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.28□□□□□ -1.72
RIPK2O43353 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIPK2O43353 MARK2P15-201ENST00000432204 2186 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIPK2O43353 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RIPK2O43353 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIPK2O43353 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RIPK2O43353 AC006971.1-201ENST00000407916 4486 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 MFSD8-242ENST00000641690 4199 ntBASIC4.28□□□□□ -1.73
RIPK2O43353 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.28□□□□□ -1.73
RIPK2O43353 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RIPK2O43353 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.27□□□□□ -1.73
RIPK2O43353 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIPK2O43353 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.27□□□□□ -1.73
RIPK2O43353 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIPK2O43353 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RIPK2O43353 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIPK2O43353 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIPK2O43353 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
RIPK2O43353 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RIPK2O43353 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIPK2O43353 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
RIPK2O43353 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.27□□□□□ -1.73
RIPK2O43353 AC103591.2-201ENST00000265259 766 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 MIR298-201ENST00000401212 88 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.27□□□□□ -1.73
RIPK2O43353 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.27□□□□□ -1.73
RIPK2O43353 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.27□□□□□ -1.73
RIPK2O43353 AC234779.1-201ENST00000425910 285 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AF228730.2-201ENST00000438784 848 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AL356535.1-201ENST00000440335 398 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.27□□□□□ -1.73
RIPK2O43353 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.27□□□□□ -1.73
RIPK2O43353 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.27□□□□□ -1.73
RIPK2O43353 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.27□□□□□ -1.73
RIPK2O43353 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.27□□□□□ -1.73
RIPK2O43353 RPL23AP81-201ENST00000455252 467 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AC092324.1-201ENST00000468671 324 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.27□□□□□ -1.73
RIPK2O43353 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.27□□□□□ -1.73
RIPK2O43353 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.27□□□□□ -1.73
RIPK2O43353 AC020593.1-201ENST00000507399 299 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.27□□□□□ -1.73
RIPK2O43353 FTH1P9-201ENST00000513251 355 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 RN7SKP141-201ENST00000516167 338 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 RN7SKP234-201ENST00000517173 224 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
RIPK2O43353 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.27□□□□□ -1.73
RIPK2O43353 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.27□□□□□ -1.73
RIPK2O43353 RN7SL690P-201ENST00000582087 240 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AC128687.2-201ENST00000609657 566 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AL356121.2-201ENST00000624715 780 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.27□□□□□ -1.73
RIPK2O43353 AL773545.4-201ENST00000637262 310 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AL513478.4-201ENST00000641636 310 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.27□□□□□ -1.73
RIPK2O43353 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
RIPK2O43353 AC106871.1-201ENST00000568324 3102 ntBASIC4.27□□□□□ -1.73
RIPK2O43353 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
RIPK2O43353 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RIPK2O43353 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RIPK2O43353 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.27□□□□□ -1.73
RIPK2O43353 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIPK2O43353 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RIPK2O43353 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RIPK2O43353 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RIPK2O43353 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RIPK2O43353 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.26□□□□□ -1.73
RIPK2O43353 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.26□□□□□ -1.73
RIPK2O43353 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RIPK2O43353 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RIPK2O43353 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RIPK2O43353 MIR331-201ENST00000362302 94 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 SNORD113.2-201ENST00000364166 89 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RIPK2O43353 RNA5SP332-201ENST00000391063 115 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 AC010385.1-201ENST00000412374 256 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RIPK2O43353 TCEA1P4-201ENST00000415066 844 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.26□□□□□ -1.73
RIPK2O43353 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.26□□□□□ -1.73
RIPK2O43353 RPL7P53-201ENST00000421245 739 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.26□□□□□ -1.73
RIPK2O43353 AC008072.1-201ENST00000434254 824 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.26□□□□□ -1.73
RIPK2O43353 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.26□□□□□ -1.73
RIPK2O43353 AL162591.2-201ENST00000449634 317 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 RPL5P32-201ENST00000454085 879 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 HMGB3P30-201ENST00000457863 606 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 RPS20P21-201ENST00000466859 343 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 AC069499.1-201ENST00000489433 509 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.26□□□□□ -1.73
RIPK2O43353 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
RIPK2O43353 AC092045.1-201ENST00000495716 1231 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RIPK2O43353 AC090071.1-201ENST00000507713 644 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RIPK2O43353 AC005351.1-201ENST00000511152 786 ntBASIC4.26□□□□□ -1.73
RIPK2O43353 OR7H2P-201ENST00000513483 306 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms